Gene detail

Detailed information of gene08393.t1 in Actinoscyphia liui

Genomic Location: chr11:8007185...8017160
NR annotation: XP_020894837.1, fatty acyl-CoA reductase 1 isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene08393.t1

ATGGGGCCTGTTGAAGAGTTCTATGTGGACAAATGCTTGTTTATCACTGGAGCGACTGGATTTCTTGGTAAAGTTCTTTTAGAAAAGCTGTTGAGATCATGTCGAGGAATTAAACAAATCTATCTTTTGACAAGAGCTCGTGCAGATCAAACACCACAACAGAGGATAGAAAAAATACTGCAGTCGAAGTTGTTTCAAAAAGTGCAAGAAACTCCCGAGTTGGTTGACAAGGTAACAGCAATCAAGGGAGATATTTCAGAACCTGGTCTTGGGATGTCATCTGAGGACAGAGCTCTCATTACCGACAATGTTCACATTGTCTTTCATTCTGCTGCTACAGTACGATTTGACGAGGAACTGAGAACGTCCTTGAAGATAAATGTCAAAGGAACTGAGGAAATGATAAAATTATGCAAAGAGACAAAACAATTAGAGGTCTTGGTCCATGTTTCTTCCACATATGCCAACTGTGACAGATACTACATCGAAGAGAAAATCTACCCTCCAGCAGTAGAACCAGAAAAACTAAGCACATCGCTTGAATGGATGACGGACAATATGGTGGAGGCCCTTACTCCAGCCATTATTGACAAGCGACCTAATACGTACACTTTCACCAAAAGCCTTGCTGAGCACTTGCTTTCCCAACAAGCAACAGATATCCCGGTTGCTATCTTTAGACCGTCAATTATTGGTTCATCACTGAAGCAGCCTTTCCCTGGATGGGTTGATAACTATAATGGACCATCTGGACTCTTTGTTATGGCAGGAAAAGGGATGTTGAGATCCATGAGAGGAGATTTAAATGCTATTGCCGACATTATTCCAGTGGATATTGCTGTGAACATGATGATTTGCGTTGCATGGAGAACGGGCACAAAAAGGAGCGATAGTATCCCTGTGTACAATTGTTGCAGTGGCACAATCAATCCTGTAACCTGGGGCCAATTATCTGCAATCATGCAGAACAAGTTTTGTGACTATCCCATGGAAGATGTCTTCAGAAGACCTAACTTTAACTTTGAGGAGAGAAAGCTGTGGCATTTCTATTGGACTTACATCAGTCACAAGATCCCTGCCATTATTGCGGATACTCTTTCCTTCTTCATTGGAAAGAAGCCAAGAATGAACAGACTGTATAGTAAGCTTGATAAAGCTACCAACGTCATGAAAGCCTTTACTATGAAAGAATGGCAGTTCACAACAACAAATAACCTGAAGTTGCTAGACCAACTTAGTCTAGAGGACAAAGAGAGTTTTGATTTTGACATCCGAGACTTGGATTGGAATGCTTACCTTGAGACCTTTCTGTTTGGAATCAAGACTTTCCTCTTGAAGGAAGACGTCCATGACTTTAGCACAGCTCACAAACGAATCAGAAAGCTTCGTAATATTCGTTGGAGCATGTATGCACTGATGTTCGTCCTCTTCAACTGGATGCTCATCAAGAAGGTTCCATCAGTGAGAGAATTTTCCTTTAAGTGTCTTACTCGAGCTCGTGTTATCTTCCAAGTATTGCAGCCTTTTATGATCGTCAACTAGAGAAACATTATATCTTAAATCATTATAAAATCTAACGTCCTTCGACGGCGCCCCATCGTATCATTTAGGATAAATTCAACAGCCCTCGCAGGCGCCCCATCGTATCATTAATCAAATCTTGCTCGAGCTCGTGCTATGTTCCAAGCACTTCAGGCATTTATGATCGTCAACTGGAGAACATTTATAGCTTAAGTCATTAATCATTAATTTACCGTCCTTCGAAGGCGCCCCATCGTATCATTAATTATAAATCTTACTCGAGCTGGTGCTATGTTTCAAGCACTGCAGCCATATATGATTATGGACTAGATAAAATGTATAGCTTACATAATTAATCACAAATTTACTGTCATTCGCTGGCGCCCCATCGTATGATTTAGGATAAATTCACCAAATTTACTTGATATAAAACAAACTAATATATAATCTAATATATTTTTGAAGTACTTTACTAGTGACTGAAAGAAGCGTCAGTTTAGTATTAAAAAAAACATCCAGTACAGC

Protein

Uniprot

Uniprot term	Description
Q922J9	Fatty acyl-CoA reductase 1 OS=Mus musculus OX=10090 GN=Far1 PE=1 SV=1
Q8WVX9	Fatty acyl-CoA reductase 1 OS=Homo sapiens OX=9606 GN=FAR1 PE=1 SV=1
Q5R834	Fatty acyl-CoA reductase 1 OS=Pongo abelii OX=9601 GN=FAR1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03015	Sterile	Male sterility protein	Family	Interproscan
PF07993	NAD_binding_4	Male sterility protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033640	Domain	Fatty acyl-CoA reductase, C-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013120	Domain	Fatty acyl-coenzyme A reductase, NAD-binding domain	Interproscan
IPR026055	Family	Fatty acyl-CoA reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11011	MALE STERILITY PROTEIN 2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005777	Cellular Component	peroxisome	Interproscan
GO:0035336	Biological Process	long-chain fatty-acyl-CoA metabolic process	Interproscan
GO:0043231	Cellular Component	intracellular membrane-bounded organelle	Interproscan
GO:0080019	Molecular Function	alcohol-forming very long-chain fatty acyl-CoA reductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13356	FAR; alcohol-forming fatty acyl-CoA reductase	EC:1.2.1.84	Longevity regulating pathway - worm	ko04212	deepkoala