Detailed information of gene08444.t3 in Actinoscyphia liui

Genomic Location: chr11:9151985...9164943
NR annotation: XP_020893647.1, caprin-1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q1LZB6Caprin-1 OS=Bos taurus OX=9913 GN=CAPRIN1 PE=2 SV=1
Q14444Caprin-1 OS=Homo sapiens OX=9606 GN=CAPRIN1 PE=1 SV=2
Q60865Caprin-1 OS=Mus musculus OX=10090 GN=Caprin1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007303 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18293
all species →
Caprin-1_dimerCaprin-1 dimerization domainDomainInterproscan
PF03564
all species →
DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041637
all species →
DomainCaprin-1 dimerization domainInterproscan
IPR005312
all species →
FamilyProtein of unknown function DUF1759Interproscan
IPR028816
all species →
FamilyCaprinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22922
all species →
GPI-ANCHORED PROTEIN P137Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene08444.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP