Gene detail

Detailed information of gene08523.t3 in Actinoscyphia liui

Genomic Location: chr11:10940601...10942959
NR annotation: XP_031559836.1, telomere length regulation protein TEL2 homolog [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene08523.t3

ATCCTTATGATTGAAAGTCTTGGGAAGTTGTTAGACAGTTGGAGCAGCAGCAGTTCTATTCAGCACACGCCCTACGACCAACATATGTACATTAGCGCTGCGATAGTTCATATTGTTGGTTACCTTGGCAATGACGAAAGAGAGAAACAGAAGTATGGGATTTTAAAGAAGTTATTGACCGGCGTTCAGAATCATCTTGAAAGCACAGAACACAAGGTACGAAGGCTTGGAATGGTTGTTGCTGAGTGTGTGACCTCAGCTCTTGAGCCAAATTCAGAGAAGTTGTCCTTTGAGTATGAAGAAGATGACGAGACCTTGCTCATCAAGGACTTATCAAAAGGACACAAATCAGAAATGATTAAAAAATCTGATTTAAAGCCAACTACTACAGCATCTCTAAAAACAGGAAAGATGGTTACACAGAGTGAAAAAGAAAAGGTATTGGCTCAAAAACGTTCCAACAAGGATGATGATGATGATGATGATTTGGAGCCGTACGACCTCGATGAAGATGACTTGGATGGACCAACCCCACCTCGTCACCTCAGAGACAGTATGGAAGCTCTTATAGACTCCAGTAACATGGAGAAATTTGAAGCAGCTCTGAAAACCCTCGAGAAAATTGTAAGCTCTCATCCAGGTGATCTAGACGAAGTTTGTGCAGAATTAGTGAAAATATTACTCCACCTTCAAGACCAATACTCAACCGAGGACTTCATGAATCTCAGACTCAAAGCAATGGTTGCCATAACAATGAGATGTCCTTTAGCTGTCTCGAAGTATCTGACCGATGAATTCTATGGACCAAACTACAGTATTATTCAACGTCTTGACATCCTGGATGTCCTTGCTGCCAGTGCAAAGGAGCTATCTCAGCCTGTTGAAGTAACACAAGAGAAGGTCACTTCGAAAAGATTTTTACAACCAGGAGCACATTCACACTCAAATGTTGACGACACCCCAGAGTGGCAGAAGGTAATTGAAGAAAGGATAGAGAAAAAGACCAGGAGATTTGTTAAAGGACCATCTAAAGAACAGCCAAAAGCTGTTGCAAACAAGTTTGCAGACGTTGCCGGGCACTTCTTCTACCCACTGATGAAGAACTTTGATCACAAGCAGAACACACTAGATCTCTTAGGAGATGACAGCTTTGTACTCGGCAGGCTAATCTACACCTTAGGGGTCATTGTACACTGTGCAAGGGGCACTCCAGGGGTACACAACATGGGCGTGGCACTCATAGAGTTTTCCTGGGCGCTGCGATACCACAATGAGGCTGTTGTCCGGCAGGTGCTCGTGTTTGCTTTAGTTATGGTGTTTAGTAGTGTCCCAATTGCATTACTTCTCAGTGATGGAAAGGAGGGAGTCTTTGAGGTTCATAGTTGGCTGAAAGACTTAATGGCGAAGGACGACAATGTTGATGTTAAAAGGACAGCTGGTCAGGCTCTTGTGGTACTAGAAGATGCTTTAAAAAAAGAGATGCAGGATTCGCAAGCATAAAGAACCATACAAACAGTAGGCTGTGTTAGCAGGCATTCTTTGCATGGGTGAGGGAGAATACGTCGTTATAACAAATTTGTGGGAATAGGGCCAAAATCTTTGTTAGGCTTTTGTTAATAGTTATTTTGTCAAAGCAGAATTAAGTGGTGTAGATTTGCCCATATAATAAGATGTTGGTAGACAGTTAGCATGACTAATAATAATAATACTACTTTATTTATATGGCGCATATTTCATGTGCATGATAATGACATATGATAGGATTAAAAGGATTTCTACGGTGCTTATCTCCCTCGCCCACACAAGGAACGCCTGCTATGCAGGCTATACAAACAGTGTCATTTATAGACTGTTAGGTGATGTATTGCTGAGTACAGCAATAATAATAACTTTGACTAGATATTTTCTGAATACCTCGAAATTAAACGCTTCCATCTACATGATCTAGTAAATAGCCACAAACTGTGAGTTTGGGCTACCTGTGGACCGAGCAAAAACCGAAAAATGTCACTGATTTGGTGAAAGATCGGATAGACATTGGCAGACACTTCGGAAAATCACTGTCTTCAGGGAGTAAAGGAGTCCAAAGTCTTCAAAACGATTACTTGGGATTTTTGTTTTATTCAAAGGGCTTATTCCTGTAATAACCTAAATACCAATAATATAATGTGAGAGCCGAAGGGCCCACTATGGAGGAGGGGAGGCAAGTAGGGGAAGCAAGGAGGGGAGGCAAGATTTAAAAACCTCTGGCACCCAGGGTACATTAAAAGTTATCATACCTTTGGAATCTATTGGGAGTGGTCATTATTTATGGCTAGGGGGGATGGTAAATTGGAATAGTCAACGTGACAAACGTTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GPP1	Telomere length regulation protein TEL2 homolog OS=Xenopus laevis OX=8355 GN=telo2 PE=2 SV=2
Q9DC40	Telomere length regulation protein TEL2 homolog OS=Mus musculus OX=10090 GN=Telo2 PE=1 SV=2
Q7T006	Telomere length regulation protein TEL2 homolog OS=Danio rerio OX=7955 GN=telo2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007513 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10193 all species →	Telomere_reg-2	Telomere length regulation protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019337 all species →	Domain	Telomere length regulation protein, conserved domain	Interproscan
IPR038528 all species →	Homologous_superfamily	TEL2, C-terminal domain superfamily	Interproscan
IPR051970 all species →	Family	Telomere Length Regulation TEL2	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15830 all species →	TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0007004 all species →	Biological Process	telomere maintenance via telomerase	Interproscan
GO:0042162 all species →	Molecular Function	telomeric DNA binding	Interproscan
GO:0050821 all species →	Biological Process	protein stabilization	Interproscan
GO:0051879 all species →	Molecular Function	Hsp90 protein binding	Interproscan
GO:0070209 all species →	Cellular Component	obsolete ASTRA complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene08523.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.