Gene detail

Detailed information of gene08543.t1 in Actinoscyphia liui

Genomic Location: chr11:11158634...11160671
NR annotation: XP_031564945.1, myosin regulatory light polypeptide 9-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9CQ19	Myosin regulatory light polypeptide 9 OS=Mus musculus OX=10090 GN=Myl9 PE=1 SV=3
P02612	Myosin regulatory light chain 2, smooth muscle major isoform OS=Gallus gallus OX=9031 PE=1 SV=2
P24032	Myosin regulatory light chain 2, smooth muscle minor isoform OS=Gallus gallus OX=9031 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001056 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00036 all species →	EF-hand_1	EF hand	Domain	Interproscan
PF13499 all species →	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050403 all species →	Family	Myosin Regulatory Light Chain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23049 all species →	MYOSIN REGULATORY LIGHT CHAIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016460 all species →	Cellular Component	myosin II complex	Interproscan
GO:0032036 all species →	Molecular Function	myosin heavy chain binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13448	CML; calcium-binding protein CML	-	Plant-pathogen interaction	ko04626	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.