Gene detail

Detailed information of gene08601.t1 in Actinoscyphia liui

Genomic Location: chr11:12119260...12128359
NR annotation: XP_020906495.2, prostaglandin reductase-3 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BGC4	Prostaglandin reductase-3 OS=Mus musculus OX=10090 GN=Ptgr3 PE=1 SV=1
Q24K16	Prostaglandin reductase-3 OS=Bos taurus OX=9913 GN=PTGR3 PE=2 SV=1
Q8N4Q0	Prostaglandin reductase 3 OS=Homo sapiens OX=9606 GN=PTGR3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006897 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan
PF08240 all species →	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020843 all species →	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR051397 all species →	Family	Zinc-containing alcohol dehydrogenase-like protein	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR002364 all species →	Conserved_site	Quinone oxidoreductase/zeta-crystallin, conserved site	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013154 all species →	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43677 all species →	SHORT-CHAIN DEHYDROGENASE/REDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0036132 all species →	Molecular Function	obsolete 13-prostaglandin reductase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07119	PTGR3, ZADH2; prostaglandin reductase 3	EC:1.3.1.48	Arachidonic acid metabolism	ko00590	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.