Detailed information of gene08653.t1 in Actinoscyphia liui

Genomic Location: chr11:13004813...13033464
NR annotation: XP_028514626.1, histone-lysine N-methyltransferase SETDB1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32KD2Histone-lysine N-methyltransferase eggless OS=Drosophila melanogaster OX=7227 GN=egg PE=1 SV=1
Q28Z18Histone-lysine N-methyltransferase eggless OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=egg PE=3 SV=2
O88974Histone-lysine N-methyltransferase SETDB1 OS=Mus musculus OX=10090 GN=Setdb1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002134 (this species only)
Transcription factor familyMBD · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18359
all species →
Tudor_5Histone methyltransferase Tudor domain 1DomainInterproscan
PF01429
all species →
MBDMethyl-CpG binding domainDomainInterproscan
PF00856
all species →
SETSET domainFamilyInterproscan
PF18358
all species →
Tudor_4Histone methyltransferase Tudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041291
all species →
DomainHistone methyltransferase, Tudor domain 1Interproscan
IPR046341
all species →
Homologous_superfamilySET domain superfamilyInterproscan
IPR001739
all species →
DomainMethyl-CpG DNA bindingInterproscan
IPR003616
all species →
DomainPost-SET domainInterproscan
IPR007728
all species →
DomainPre-SET domainInterproscan
IPR001214
all species →
DomainSET domainInterproscan
IPR041292
all species →
DomainHistone methyltransferase, Tudor domain 2Interproscan
IPR051516
all species →
FamilyHistone-lysine N-methyltransferase SETDBInterproscan
IPR016177
all species →
Homologous_superfamilyDNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46024
all species →
HISTONE-LYSINE N-METHYLTRANSFERASE EGGLESSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0042054
all species →
Molecular Functionhistone methyltransferase activityInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0010629
all species →
Biological Processnegative regulation of gene expressionInterproscan
GO:0046974
all species →
Molecular Functionhistone H3K9 methyltransferase activityInterproscan
GO:0051567
all species →
Biological Processobsolete histone H3-K9 methylationInterproscan
GO:0070828
all species →
Biological Processheterochromatin organizationInterproscan
GO:0090309
all species →
Biological Processobsolete positive regulation of DNA methylation-dependent heterochromatin formationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11421SETDB1; [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferaseEC:2.1.1.366
Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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