Gene detail

Detailed information of gene08659.t1 in Actinoscyphia liui

Genomic Location: chr11:13080492...13104356
NR annotation: XP_031574151.1, LARGE xylosyl- and glucuronyltransferase 2-like [Actinia tenebrosa]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene08659.t1

ATGCTTCTTGCAATGGGGGTACTCAAAGTAAGAATTTTAGGGATTCTGCTGATGCTGTCCCTCGGTTCGTCCGTTGTTCTGTGGTGGGTGACTCCGCCGGTACATCATTCACAAGGAAATGAAATACCAAGACTGCATACAGCTAAACACGACGACAGCTTGTTATGGAAAAGAATCAATTCACTAAAAAACCAGAATAATAATTTATTGAGCCAAAATAAGATTGCCAAACAACGCCTTCAAGACATGGACAAAAAATTAATAAACTACAGAAATATAATTGAAGCTCACACAGGCAACAAGACATCTGGTTGTTCAGAGATAATAAGTGTGTCCCAGTGTGAGGTTATTCACATCACAGTAGTCTGTGCAGGTCACGACACCACAAGACAAGCCATTACTCTCATTAAATCTATTCTATTCTATCGTAACAACCCACTGCACTTCCACTTCTTATCCGACACGATATCAGAACTCATTCTATCGACACTCTTCAAAACTTGGAAACTTCCTGCAGTTGATACAGATTTCTATCCCATATCTAATGTATTGGACAAGGTCAAGTGGATCCCTAACAAACATTATTCAGGGGTCTTTGGGTTAATGAAACTGGTCTTGACAGAAGTTTTACCAGAAGCTTTAGATAAGGTAATTGTACTTGACACTGATATTATATTTGCTTCTGACATTTCTGAACTATGGAGACTACTTGATAACCTTACTGGAAAGAAGGCAGTAGGTTTAGTGGAGAATCAGAGTGATTGGTATCTGGGTAAATTATGGAAGAACCACAAACCTTGGCCTGCTTTGGGTCGAGGCTTTAACACAGGAGTAATGATTCTAGACTTGTTTAAGTTACGTAAAATGAACTGGAAGGACATTTGGAGATTGACGGCAGAGAAAGATCTGATGAACATGCTGTCAACCTCTCTCGCCGACCAGGACATCTTCAATGCAGTGATAAAGTACAGACCCTATATGGCCTACACACTACCCTGTGTCTGGAATGTACAGCTAGGGGACAACACCAGGAGTGAGCAATGCTATTCAAAAGTTACAGAACTTAAGATTATTCATTGGAATTCTCCCAATAAACTACTGGCCATAAACAAACACGGAGACTTCTTCAGGAATCTTTATCTAACATTCCTTGAGTATGATGGCACATTGTTGAGACGTTGGCTTTTCCATTGTGAAGATTTTGAAACTGATAAGGACAATAACAGTACTATGTCGTCAAGTGAGATCGGTGTTGTTACCAAGGTACCTGGTATTGACAGTGAAGACCCTTGTTATGACTTCAAACAACAACAATTCATCACCCACAGAACACACCTGTACTACTTGAGCTATGACTTTACCACGGCGGTAGGAGAGTATGATGTCACTCTTGTAGCTCAGCTCTCTATGGACAGGTTGCAGATGGTGGAGGCTTTGTGTCATAAATGGGCAGGTCCCATAAGCCTTGCAATGTACATGTCTGACAGCGAAGCTCAGCAGTTTGTGAACTACGCCCTTAACTCACCACTACTGAAGTCAAGAAAGAACGTGGGATATCATGTTGTCTATAAAGAAGGGCAATTCTATCCCGTAAACTATTTACGTAACGTCGCGTTAGAGAACACCCGTACCCCTTACGTGTTCCTCACGGATATTGACTTTCTACCGATGCCTGAAATGGATGTGTACATTAGGCAAATGTTAAAGGTTTCTCCTACATCGAACGCCAAGAAGGCGTACGTTATCCCAGCGTTCGAGACACCACGGTACAAACTAAATTTCCCGCGCACCAAACCTGAGCTGCTTTCTCTATGGGATCTTGGTAATGTTTTTACGTTTAGGTCCAACGAGTGGAGTAAAGGACATGCGCCGACAAACTTTGCCAAGTGGAGAACAGCTACTACGCCCTACACTGTGCAGTGGGAAGAGGATTTCGAGCCGTACATCGTTGTACCTAAAAATATTTTACGGTACGACGCCAGATTCGTTGGGTTTGGTTGGAACAAAGTCTCACACATAATGGAAGTTCATGCCCAAGGGTATGAATTTGTTGTTCTCCCCAACGCGTTCATCGTCCATCTACCACACTCACTGTCGTTTGATATATTTAAGTTTCGTTCAAGTCAGCAATATCGCAGATGTATAAAAGAATTGAAAGAGGAATTTAAGAAATATCTTTTAGAGAAATATGGACAGGATAGGTTTCCTGCTCTAGAGCTTGACAGCTAA

Transcript

gene08659.t1

CATTTGTACTTGACAGACGAGGGCAAGATTTTCTGTATTTACGATGTGAATCTATGAACATTTACCGGCATCTAAGACTCCTACGAGCCACTACTTGTCGTCTTACTTGCAAACCATGGCACAGAGCCTTCAGTTAGCGAGATCGTTGCAATGCTAGGAGCTACAAGGCACTAGGAAATGCTTCTTGCAATGGGGGTACTCAAAGTAAGAATTTTAGGGATTCTGCTGATGCTGTCCCTCGGTTCGTCCGTTGTTCTGTGGTGGGTGACTCCGCCGGTACATCATTCACAAGGAAATGAAATACCAAGACTGCATACAGCTAAACACGACGACAGCTTGTTATGGAAAAGAATCAATTCACTAAAAAACCAGAATAATAATTTATTGAGCCAAAATAAGATTGCCAAACAACGCCTTCAAGACATGGACAAAAAATTAATAAACTACAGAAATATAATTGAAGCTCACACAGGCAACAAGACATCTGGTTGTTCAGAGATAATAAGTGTGTCCCAGTGTGAGGTTATTCACATCACAGTAGTCTGTGCAGGTCACGACACCACAAGACAAGCCATTACTCTCATTAAATCTATTCTATTCTATCGTAACAACCCACTGCACTTCCACTTCTTATCCGACACGATATCAGAACTCATTCTATCGACACTCTTCAAAACTTGGAAACTTCCTGCAGTTGATACAGATTTCTATCCCATATCTAATGTATTGGACAAGGTCAAGTGGATCCCTAACAAACATTATTCAGGGGTCTTTGGGTTAATGAAACTGGTCTTGACAGAAGTTTTACCAGAAGCTTTAGATAAGGTAATTGTACTTGACACTGATATTATATTTGCTTCTGACATTTCTGAACTATGGAGACTACTTGATAACCTTACTGGAAAGAAGGCAGTAGGTTTAGTGGAGAATCAGAGTGATTGGTATCTGGGTAAATTATGGAAGAACCACAAACCTTGGCCTGCTTTGGGTCGAGGCTTTAACACAGGAGTAATGATTCTAGACTTGTTTAAGTTACGTAAAATGAACTGGAAGGACATTTGGAGATTGACGGCAGAGAAAGATCTGATGAACATGCTGTCAACCTCTCTCGCCGACCAGGACATCTTCAATGCAGTGATAAAGTACAGACCCTATATGGCCTACACACTACCCTGTGTCTGGAATGTACAGCTAGGGGACAACACCAGGAGTGAGCAATGCTATTCAAAAGTTACAGAACTTAAGATTATTCATTGGAATTCTCCCAATAAACTACTGGCCATAAACAAACACGGAGACTTCTTCAGGAATCTTTATCTAACATTCCTTGAGTATGATGGCACATTGTTGAGACGTTGGCTTTTCCATTGTGAAGATTTTGAAACTGATAAGGACAATAACAGTACTATGTCGTCAAGTGAGATCGGTGTTGTTACCAAGGTACCTGGTATTGACAGTGAAGACCCTTGTTATGACTTCAAACAACAACAATTCATCACCCACAGAACACACCTGTACTACTTGAGCTATGACTTTACCACGGCGGTAGGAGAGTATGATGTCACTCTTGTAGCTCAGCTCTCTATGGACAGGTTGCAGATGGTGGAGGCTTTGTGTCATAAATGGGCAGGTCCCATAAGCCTTGCAATGTACATGTCTGACAGCGAAGCTCAGCAGTTTGTGAACTACGCCCTTAACTCACCACTACTGAAGTCAAGAAAGAACGTGGGATATCATGTTGTCTATAAAGAAGGGCAATTCTATCCCGTAAACTATTTACGTAACGTCGCGTTAGAGAACACCCGTACCCCTTACGTGTTCCTCACGGATATTGACTTTCTACCGATGCCTGAAATGGATGTGTACATTAGGCAAATGTTAAAGGTTTCTCCTACATCGAACGCCAAGAAGGCGTACGTTATCCCAGCGTTCGAGACACCACGGTACAAACTAAATTTCCCGCGCACCAAACCTGAGCTGCTTTCTCTATGGGATCTTGGTAATGTTTTTACGTTTAGGTCCAACGAGTGGAGTAAAGGACATGCGCCGACAAACTTTGCCAAGTGGAGAACAGCTACTACGCCCTACACTGTGCAGTGGGAAGAGGATTTCGAGCCGTACATCGTTGTACCTAAAAATATTTTACGGTACGACGCCAGATTCGTTGGGTTTGGTTGGAACAAAGTCTCACACATAATGGAAGTTCATGCCCAAGGGTATGAATTTGTTGTTCTCCCCAACGCGTTCATCGTCCATCTACCACACTCACTGTCGTTTGATATATTTAAGTTTCGTTCAAGTCAGCAATATCGCAGATGTATAAAAGAATTGAAAGAGGAATTTAAGAAATATCTTTTAGAGAAATATGGACAGGATAGGTTTCCTGCTCTAGAGCTTGACAGCTAACAACAGCTTTATTTAGATAGCTATCTATTTCCATACTCGTACCCAGTGTCCCCTTTTGATAAAAGCCGAGAAGGCACTGGGTACGAGCGTGTCGTTATTTATAAAAAGATTATTTTATTACACTTTATATGGTAGTCAAACAGGCTCACGTAGCACAAAATGCGTACAGCGCATGCGTAGTCACATTCGACACGATGTATCTCCCATATGGCTTAAAATGGGCAGATGGTTACTGTTAAAGACGTTCCCCTCAGGGATTGTTATGTTAAAAAGCGATATGAAAAGTAGCAGGTAAAATAACTGAATGGCCGCCTTGTGAAGTTATTGAAAAAGAATGAGAAAAAAGTATTTTTTTCATTCCTACCCATCCCTTTGTCATCCCATTCAATTCTCATTCATCCATTTATTTCCATAGACCCGTTGCAGTCAATTCCCTCTCCGGTTCAATATACATTATACTTTGGGAATGTTTTTCCATTTCAAAACCCTTGGGAATAAGATTCTTTGTTTGAGTGACATCCATATTAATGTGTCTTCTCAAGCGTTACCAGTAAAGAAAGAAATAATACTCAAGGCAATGACACGTGATCTGAAATGGGAAAACATTACACCCAAAGTTACAGGTTTATTTGGAGGACAAGGCAATGAAATTTTTTGCATAAGAATAGTTTTCAACTCCCAGGAGAGAGAAGAACTACCATCTTGTCCTCCAAATTGAACAGGAAAGGAAATTACTGCAAGGGGTATCTTGCTATTGAAAATCAATTGAAATTAAAGTATTTTTCTAGTCAATTACAACTGATGAAAATCAGAAAAGTTTACTCTGTACAGATACTTTTATACAAATTTAATTCAGAATCTTAATCAGAATTTATATTGAAATATTATTGGTAATAATATGTTACTGTTGATTTATCTATCTGTAAATAAACATGTTTACTTTGATACCAGTGTGAGAGATATCATATGTACATTTTTGCTTCCCATGTGCCTCCTGTATGCGACCTATACTCGTCCTGAATACGTCCCGTCCCGTATGCGACCAGTATGCGTCCTGTGTGCGTCCCGTATGCGACCTGTATACGTCCTAAATACACCTGTATGCCACCATCTTGATGTTGTGAATACAATTGAAATTCCGCTTATGGTGCGCACCTCTTGATCTGGCTGCTATTACGGAAACCTCGATCGATAATACGAACAGTCGTTAGAGCAAATTTCGTATGAGTGGGAAGTGGTTGCGGTCCGTTCCCTGCCGTGACAGTACCGTGTCCGAGCATTCTGATTGGACGCGCAGTGATTTCGTGCACTGTGATTGGTTGAATAGATGACGTACCGTGATTCCGTACCGTGACCGTAACTCCGTGCCGTAGGTTTCCCACTCATACGAAAACGACTCTATTGTATTTTCGGTGGAACCCTGGCCGGCCGTTAATATACGGACACTGTATCGACACCGCGGTCAAACGATTGCGCATGCGTGGCAACAGTGCTTGTAAACATTAGGATTGTCGGACGACTGTGTTTAAAGTCGATTTATAAGAAATTCCCTGGATATTTAAGCTCATTTTTTTCTGTATATAATCTTTGTCATTAGACTGATTCCATAAGTCGGTCCCAGTTCGCTCTCTGTCGATTCTGATTTTCGCTCACCAACCGACTTATAACTTTTCAGATCAGATTTTGTGCAACGTCGCGAAATACGGCGACCTCCAATCAAATCGCTCGTTATATGATTCAGTAAATTTGATCCAATCACAATCGAGTTCTTATTACCCAATTTTAAAAATAACTTCCGGTAAGTCGCCATTTTATTTTCACCCGTTGCATCGTACTGGGAAAGTTAGGAAGAGAAGTATGTTTTTGATATAATTCCTTTCAAGTCAAGTTATTGCAAGAGTCCTGGTGTCATTGCTTGCGTATCTCAAGTGCCACAATGCTGTTAGTCTTCCAACGGCTGCAGAGTATTCAAATTTAGTTAACTGCAGAACGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Z1M7	Xylosyl- and glucuronyltransferase LARGE1 OS=Mus musculus OX=10090 GN=Large1 PE=1 SV=1
O95461	Xylosyl- and glucuronyltransferase LARGE1 OS=Homo sapiens OX=9606 GN=LARGE1 PE=1 SV=1
Q66PG1	Xylosyl- and glucuronyltransferase LARGE2s OS=Danio rerio OX=7955 GN=large2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003906 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13896 all species →	Glyco_transf_49	Glycosyl-transferase for dystroglycan	Domain	Interproscan
PF01501 all species →	Glyco_transf_8	Glycosyl transferase family 8	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029044 all species →	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR002495 all species →	Family	Glycosyl transferase, family 8	Interproscan
IPR051292 all species →	Family	Alpha-1,3-xylosyltransferase/Beta-1,3-glucuronyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12270 all species →	GLYCOSYLTRANSFERASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016757 all species →	Molecular Function	glycosyltransferase activity	Interproscan
GO:0015020 all species →	Molecular Function	glucuronosyltransferase activity	Interproscan
GO:0035269 all species →	Biological Process	protein O-linked mannosylation	Interproscan
GO:0042285 all species →	Molecular Function	xylosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09668	LARGE; glycosyltransferase-like protein LARGE	EC:2.4.2.- EC:2.4.1.-	Glycosyltransferases	ko01003	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.