Detailed information of gene08727.t1 in Actinoscyphia liui

Genomic Location: chr11:14355851...14360467
NR annotation: XP_020899585.1, uncharacterized protein LOC110238266 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q09948Chromatin structure-remodeling complex subunit rsc4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsc4 PE=1 SV=1
Q07442Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BDF2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007915 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439
all species →		BromodomainBromodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001487
all species →		DomainBromodomainInterproscan
IPR036427
all species →		Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR037800
all species →		FamilyHistone acetyltransferase GCN5Interproscan
IPR000315
all species →		DomainB-box-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45750
all species →		GH11602PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000123
all species →		Cellular Componenthistone acetyltransferase complexInterproscan
GO:0004402
all species →		Molecular Functionhistone acetyltransferase activityInterproscan
GO:0006338
all species →		Biological Processchromatin remodelingInterproscan
GO:0010484
all species →		Molecular Functionhistone H3 acetyltransferase activityInterproscan
GO:0043966
all species →		Biological Processobsolete histone H3 acetylationInterproscan
GO:0045944
all species →		Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene08727.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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