Detailed information of gene08747.t1 in Actinoscyphia liui

Genomic Location: chr11:14685978...14700121
NR annotation: XP_032231780.2, uncharacterized protein LOC116614660 [Nematostella vectensis]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IS14Ras guanine nucleotide exchange factor J OS=Dictyostelium discoideum OX=44689 GN=gefJ PE=2 SV=1
Q8IS15Ras guanine nucleotide exchange factor I OS=Dictyostelium discoideum OX=44689 GN=gefI PE=2 SV=1
Q54FF3Ras guanine nucleotide exchange factor K OS=Dictyostelium discoideum OX=44689 GN=gefK PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000096 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00617
all species →
RasGEFRasGEF domainFamilyInterproscan
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR036964
all species →
Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR001895
all species →
DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR023578
all species →
Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan
IPR052055
all species →
FamilyHepadnavirus polymerase/reverse transcriptaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33050
all species →
REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264
all species →
Biological Processsmall GTPase-mediated signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene08747.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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