Gene detail

Detailed information of gene09065.t1 in Actinoscyphia liui

Genomic Location: chr11:20997473...21007707
NR annotation: XP_048579323.1, uncharacterized protein LOC125560926 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene09065.t1

ATGGCCAACATCAACCGTGCACCGAAACAATGGTGCTTATCAAAAGTCGAAACGCTGAATTCATATGACAATTGGAAGCAAAACTTATTGTACACCCTTTCACTCGATCAGAACTTCGCCTCGTTCCTAGTAGAAAATGCCTCCTGGGGAAGAAAATCTAAAGCTGACCCCATCAGATGCTTCATCGACGACGACGAAGAAGTTCCCGCCGCGAGGCGACGAACCGCTCAGCAAAAAGTCACTATGCTAGAGCTCATGCTAGGCCAAATAGCAAATTATTGTCCCATCATATCAAGATCAACCCTGGTGAAAGGAAGCACATCTTTAGACTCAATCTGGCAAGCCATACGACTACACTTCGGATTTCAAACAACAGGTGCACATTTCATCGACTTTGACTCCATCACACTTGACCCAGACGAACGCCCAGAAGATTTATACCAACGCCTTATGGCCTTCGTAGAGGATTGTCTGCTCAAAGCTAACGAACTAACCCACCACGGTGACACTACACAAGAAGATGAAGAGTTGTCTCCCACAGTAGAGAATTTTGTTGTCCTTACCTGGTTAAGGCTCATTCACCCAGAGCTCCCTAAACTCGTGAAACAGCGCTATGGGACCGAACTGAGGTCACGCACCCTGGCTTCGATCAAACCTGAAATTTCCCAAGCTCTAAGTTCCCTGCTAGACGAGATACGAGCTGCAGACGACACCAAAGTTTTACGAGCCGGAGCCACACCATACACTCGTCGAACCACACAGCCTTACAAGCCTTACAAGCCAGTCACCAAGACACCAGCCAGACCTAGTCGATACGTGAAGACATGCCCTCTTTGCAAACAGGCTGGTCGTCAAAACCTTAACCACTTCCTCAGCGAGTGCAACTTTCTTCCAGAACAGGATAGAAAGTATATGGTAAAAGCTAGACAAATCGCTTCCATCCTCGACGACGACCCAGACGAGACCACAGATGACTACTGTACAGAGCCTGAGAGTCAAGCCAAACGTTTGGAATTTCAGAATATTATCAATACTCATGGACCAGCCATTATTAATGTTAATGAGACACATATCAGTGACTCTGTTCATTCATCTGAAATCCTGGATAATGGATATACAATCTTTCGCAGAGATAGAGACATGCATGGGGGTGGAGTGCTGTCCGCCTTCTCAAATGATCTAATAGTATCTCATGAACACCACTTATCGGGCAACTATGAATGTGTCTGGTCCAAAGTGGAGATTGCAGGTAGCAAACCGCTCTATATTGGCTCCATCTACAGACCACCTAGTTCTGATGTTGAACCACTGGATGCTCTGGATCAAACATTATGCCACCTAGCTCAGAAATCTCTTCCGAACATACTACTGACTGGTGATTTTAACCTGCCAAGTGTATCTTGGGATGATGAAGATGGCTACTCCATTCAATCCAATCCTGCATATGGTGTGGAAATTAACAACAAACTATTGGACATTGTAAATGACCACTCACTGACACAACATGTGAAACAACCAACCAGAGGTCAAAATATCTTAGACCTAGTGTTCACAACGAACCCAAACATGGTTACCAATCTGGAAATTCACAGTGGTATGAGTGATCATGATGCCATTGTCTTTGATATCAACTTAAAACCATCTATTAGTAGAAAACCACCAAGAAAAGTGTTCCTGTTTAAGAAAGGTAACATGGAAGCTGTCAGAATGGACTTGAAAAAATGTTTTGATGAATATCTAGCTACAGAGGCACTAACTAAGTCAGTGGATGAGAACTACCATTTCTTTAAAACATCAATTAATGAAGTCATGAAGAAACACATGCCACAAAAGAACATCAGTAGGCGGTGGAATGTACCCTGGTTAACAAACTTCATCAGACATATGACTAGAAAGAAGCAGAGACTATACAATAAAGCACGAAGAACTGATGATCCCTCCATCTGGCGAAAATTTAAAGATCTGAGAAAGCATATTAAGAAAGAATTAATTAATGCACATAATGAATATGTATCCCAGCTGCTATCAACTCCTGAGGAATCAAGCCCTCATAAACCAGTACCAGCTAAGCGTTTCTGGTCTTATGTTAAATCTAAGAAATCCCATGATGTCGGAGTGGCTCCTCTGAAGAGTGACCACGGCGGGCATAAATGA

Transcript

gene09065.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14570	REX1, REXO1, REXO5, RNH70; RNA exonuclease	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala