Detailed information of gene09983.t2 in Actinoscyphia liui

Genomic Location: chr3:13909830...13930267
NR annotation: XP_031548534.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like isoform X2 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C6B8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Svep1 PE=1 SV=1
A2AVA0Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Mus musculus OX=10090 GN=Svep1 PE=1 SV=1
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000589 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF12661
all species →		hEGFHuman growth factor-like EGFDomainInterproscan
PF12662
all species →		cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00024
all species →		PAN_1PAN domainDomainInterproscan
PF00431
all species →		CUBCUB domainDomainInterproscan
PF00354
all species →		PentaxinPentaxin familyDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000859
all species →		DomainCUB domainInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR003609
all species →		DomainPAN/Apple domainInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR006558
all species →		DomainLamG-like jellyroll foldInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR035914
all species →		Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001759
all species →		FamilyPentraxin-relatedInterproscan
IPR051277
all species →		FamilySEZ6/CSMD/C4BPB Neuronal & Immune RegulatorsInterproscan
IPR013032
all species →		Conserved_siteEGF-like, conserved siteInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR026823
all species →		DomainComplement Clr-like EGF domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45656
all species →		PROTEIN CBR-CLEC-78Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene09983.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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