Detailed information of gene10106.t1 in Actinoscyphia liui

Genomic Location: chr3:16150672...16154193
NR annotation: XP_031567514.1, ubiquitin-like protein ATG12 [Actinia tenebrosa]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O94817Ubiquitin-like protein ATG12 OS=Homo sapiens OX=9606 GN=ATG12 PE=1 SV=1
Q9CQY1Ubiquitin-like protein ATG12 OS=Mus musculus OX=10090 GN=Atg12 PE=1 SV=1
Q2TBJ5Ubiquitin-like protein ATG12 OS=Rattus norvegicus OX=10116 GN=Atg12 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008435 (this species only)
Ubiquitin familyULD|UBL|ATG8 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04110
all species →		APG12Ubiquitin-like autophagy protein Apg12 DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007242
all species →		FamilyUbiquitin-like protein Atg12Interproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13385
all species →		AUTOPHAGY PROTEIN 12Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000045
all species →		Biological Processautophagosome assemblyInterproscan
GO:0000422
all species →		Biological Processautophagy of mitochondrionInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006501
all species →		Biological ProcessC-terminal protein lipidationInterproscan
GO:0034045
all species →		Cellular Componentphagophore assembly site membraneInterproscan
GO:0034274
all species →		Cellular ComponentAtg12-Atg5-Atg16 complexInterproscan
GO:0044804
all species →		Biological ProcessnucleophagyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08336ATG12; ubiquitin-like protein ATG12-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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