Detailed information of gene10296.t2 in Actinoscyphia liui

Genomic Location: chr3:19396421...19406248
NR annotation: XP_028517047.1, netrin-1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O09118Netrin-1 OS=Mus musculus OX=10090 GN=Ntn1 PE=1 SV=3
Q90922Netrin-1 OS=Gallus gallus OX=9031 GN=NTN1 PE=1 SV=1
O95631Netrin-1 OS=Homo sapiens OX=9606 GN=NTN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001810 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01759
all species →
NTRUNC-6/NTR/C345C moduleDomainInterproscan
PF00053
all species →
Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055
all species →
Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008211
all species →
DomainLaminin, N-terminalInterproscan
IPR002049
all species →
DomainLaminin-type EGF domainInterproscan
IPR008993
all species →
Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR018933
all species →
DomainNetrin module, non-TIMP typeInterproscan
IPR001134
all species →
DomainNetrin domainInterproscan
IPR050440
all species →
FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →
NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0009887
all species →
Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →
Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene10296.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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