Gene detail

Detailed information of gene10545.t2 in Actinoscyphia liui

Genomic Location: chr3:22922337...22953018
NR annotation: XP_031556270.1, atrial natriuretic peptide receptor 1-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene10545.t2

AAATCGGTGGGGTGCCATGATCAAAGCTAATTTTCTTTCAAACGAAGATATTACTCTGTGGAAGTGCATGGCGACATGGCATTGTACTTTGAAACATCCCATTGTTCAGTTACATCACATTCGTGTTAATGACATACCGACACCACCATACTACTCACCTGGTGACCTGACATTCCCTGCGCTAGTTTGAATTTCAACTACATCTGCTCGATGCTGGCCACAACTTTGAGCTACAACTAAAAGCTCACAACTCGAGGAAACGACTGAATCGTCAAAAGTACAGCCATTATAGCTGATGATCAACCTGAACCGCATGCATATTCAAACTAACTTGAACCTGACATGATGTAGTTATTGTGAAACCTTCTACAGAATTTCAAGGCTTGAAAAACACTTCAAGAGAGAGAGAGAGACAAGTCACTGGAAGGCTACCCATCACCTCATCCGATAGCCTAACCGATCCAGCGCGGAGATGGTCGGTCCAAGAAGTAAGTGTGGGAAATTTCCTCTTCTGGCCGACTTGCGAACAGCTACTTTGGACTGTGGGTCAAGCCTATAGGCAGAGGGGTGTAAAGTGTATGCTTGTCTTTTATCGTGGCTGTGATCTTTGTAATTTCAGTGTATCTATGATTAGCATCTATGATACATGACTCCTGGTTGGTCATATTTACCTACAGTTGAGCTTCTGACATCGAAGGAATGAAAGTATCGTCCTTGCTTGTTGGGTCTCTTGTCCTGGAAATTCTGCTAGTGTGGTACGCCTCGTGTACAGACTATAAGTTAGGGCTGCTCATTCCTTATAAAAATGTCGACGTTTACATCGAGAATACGTACTTTGTGGGCGAGACGTACGCAGCAGCTATCACTCTAGCAGTGAATGATGTCAACAACAGAACAGACCTACTTCCTAATGACAGTTTATCCTTCGAGTGGAAAGATACAAACTGCGATGAATTTACGACCTTGAGAGACCAGATCAACATGATTCAGAGAAACTTAACTGCGTTTATTGGACCTGGCTGCCAGTGCAAGATGGCTGCGAAAAACGCGGCAGCGTTCAACAAGACCATGATATCATATATGTGTAATAGCCCAGAGTTGTCAAATAAAACCGAATACCCGACATTTGCACGAACCCTTGCCGTAGATACCAAGATTCTGCCGACAGTCCTGGCCGTTCTAAAGGAATTCTCCTGGTCAAAAGTTGCCATAGTAACCGAACGACGAGAACAGTATTCCAGAGCTACAAAGTTCATGAAGAAGGAGTTCAAAAAAATTGACATCGAGGTGACGTACTCGGCGGAGGTGCAGAATGTCTTGAAGTACAACGACGCGTTGATTTTAAAAGACAAAGTTTACGAGAAGGAGTATCAAGATGTCATACAGAACATCAAACAACAAGCTCGAATTGTGATCATGATGACAAGTTACCACATGGCGTTAGAAGGGCTTTACCATGCCAACAAAACAGGATTAATTAATGGAGACTACGTGTTTATCATCTTTGAAATGGATCCCATGATGTCTGGAAACAAGGCCAAGAACCCATTTCAATGGCTGTATCTAACAATGCGGGGTTCAATGGAGCGAGAGATGAAAGCTGCCTTGGTGGTGACTGTGAAGAGTGCCAAGGGTGAAAGGTACGACAACTTTGTCAAAAACCTCAGACTATGGACGTCTAAAGAACCATTCAACAACAAATACTACATCAACAGGACCAACCTGGCAGAGCCTCCGTTTTTTGCCGCGACATTGTACGATGCAGTTTACCAGTTTGGAGTAGCACTGAATAAAACTCTAATGAAAGGTCAGCCAGTATCTGGGACTGTCATACTTAGTCATCTAACCAACCATGTTTATGAAAGTATCCGTGGATATCAAGTGCGTATGGACCAGAATGGTGATGCTGAATACAACCTGACGCTTCTGCGCATTTCAGGATCAGGAAGACATTCTAAGATGGTGGATGTGGCGTCGTTCGTCTCGTCCAGTAACTCCTCCACTATTAAATTAAAGTTTCTAACTGGAAAAGACATCAGTTGGTTCGCTGGAGTCGAGTGGCCACCTGCCGACATGCCAACGTGTGGATTCGAAGGCGAACTTTGTATAACAGACAAAGAGTCTCACGATAACACCCACACTATCATAACTACAATATCAGTGGTTTTGGGAGTACTAGCAGTTCTTTTGATAGCTATATTATTTAGGCATTATAAAGTAGAGAGGGAACTGCACAGTCGGTTATGGAAAATCGAATATAGCGATCTTTACTTCGATCGCGCTCGTTCGAGGTCTGAATGTTCATTAGCCAGTAGTCTAGTGAGACTCACAGATGATGCAGAGATGTTCCCTCTTATCGATTATGAGGTGGACGGTGAGAAATCCACCACAGTGGCTCGTTATAAGAGTAGTGTTGTAACGGTGGCACGGCTTCCCATTCGTAGCATAGACATTAATAGAAACATTCTACTTGAGATGAAACAGGTATGGTATGACGTAATCCACTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
H2L002	Receptor-type guanylate cyclase gcy-7 OS=Caenorhabditis elegans OX=6239 GN=gcy-7 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000156 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01094 all species →	ANF_receptor	Receptor family ligand binding region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001828 all species →	Domain	Receptor, ligand binding region	Interproscan
IPR002455 all species →	Family	GPCR family 3, GABA-B receptor	Interproscan
IPR028082 all species →	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10519 all species →	GABA-B RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004965 all species →	Molecular Function	G protein-coupled GABA receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007214 all species →	Biological Process	gamma-aminobutyric acid signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0038039 all species →	Cellular Component	G protein-coupled receptor heterodimeric complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05313	GRIN; glutamate receptor, ionotropic, invertebrate	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.