Detailed information of gene10888.t1 in Actinoscyphia liui

Genomic Location: chr3:27514776...27521357
NR annotation: XP_028514841.1, AP-4 complex subunit epsilon-1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UPM8AP-4 complex subunit epsilon-1 OS=Homo sapiens OX=9606 GN=AP4E1 PE=1 SV=2
Q8L7A9AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 SV=1
Q80V94AP-4 complex subunit epsilon-1 OS=Mus musculus OX=10090 GN=Ap4e1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002707 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14807
all species →
AP4E_app_platfAdaptin AP4 complex epsilon appendage platformDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050840
all species →
FamilyAdaptor Complexes Large SubunitInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR028269
all species →
DomainAP-4 complex subunit epsilon-1, C-terminalInterproscan
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22780
all species →
ADAPTIN, ALPHA/GAMMA/EPSILONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030124
all species →
Cellular ComponentAP-4 adaptor complexInterproscan
GO:0140312
all species →
Molecular Functioncargo adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene10888.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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