Detailed information of gene10921.t3 in Actinoscyphia liui

Genomic Location: chr3:27923047...27985883
NR annotation: XP_028514495.1, LOW QUALITY PROTEIN: uncharacterized protein LOC110237730 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q12923Tyrosine-protein phosphatase non-receptor type 13 OS=Homo sapiens OX=9606 GN=PTPN13 PE=1 SV=2
Q64512Tyrosine-protein phosphatase non-receptor type 13 OS=Mus musculus OX=10090 GN=Ptpn13 PE=1 SV=2
A0A140LI67FERM and PDZ domain-containing protein 2 OS=Mus musculus OX=10090 GN=Frmpd2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002205 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00373
all species →		FERM_MFERM central domainDomainInterproscan
PF00595
all species →		PDZPDZ domainDomainInterproscan
PF09379
all species →		FERM_NFERM N-terminal domain DomainInterproscan
PF09380
all species →		FERM_CFERM C-terminal PH-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR003124
all species →		DomainWH2 domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR035963
all species →		Homologous_superfamilyFERM superfamily, second domainInterproscan
IPR014873
all species →		DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan
IPR000048
all species →		Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR001478
all species →		DomainPDZ domainInterproscan
IPR019748
all species →		DomainFERM central domainInterproscan
IPR052074
all species →		FamilyNon-receptor Tyrosine-protein PhosphatasesInterproscan
IPR018980
all species →		DomainFERM, C-terminal PH-like domainInterproscan
IPR018979
all species →		DomainFERM, N-terminalInterproscan
IPR014352
all species →		Homologous_superfamilyFERM/acyl-CoA-binding protein superfamilyInterproscan
IPR019749
all species →		DomainBand 4.1 domainInterproscan
IPR000299
all species →		DomainFERM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46900
all species →		TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003779
all species →		Molecular Functionactin bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene10921.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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