Detailed information of gene11130.t1 in Actinoscyphia liui

Genomic Location: chr3:30408537...30419524
NR annotation: XP_020902459.1, prolyl 4-hydroxylase 1 isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F4JAU3Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=P4H2 PE=1 SV=1
F4JZ24Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1
F4JNU8Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana OX=3702 GN=P4H8 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007554 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13640
all species →		2OG-FeII_Oxy_32OG-Fe(II) oxygenase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006620
all species →		DomainProlyl 4-hydroxylase, alpha subunitInterproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR044862
all species →		DomainProlyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domainInterproscan
IPR045054
all species →		FamilyProlyl 4-hydroxylaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10869
all species →		PROLYL 4-HYDROXYLASE ALPHA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0016705
all species →		Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0031418
all species →		Molecular FunctionL-ascorbic acid bindingInterproscan
GO:0004656
all species →		Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0018401
all species →		Biological Processpeptidyl-proline hydroxylation to 4-hydroxy-L-prolineInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene11130.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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