Gene detail

Detailed information of gene11158.t1 in Actinoscyphia liui

Genomic Location: chr3:30722400...30726506
NR annotation: XP_020892881.2, uncharacterized protein LOC110232115 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8AI49	Glyoxylate/hydroxypyruvate reductase A OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=ghrA PE=3 SV=1
B5XXL3	Glyoxylate/hydroxypyruvate reductase A OS=Klebsiella pneumoniae (strain 342) OX=507522 GN=ghrA PE=3 SV=1
A6T7B8	Glyoxylate/hydroxypyruvate reductase A OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=ghrA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003408 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02826 all species →	2-Hacid_dh_C	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006140 all species →	Domain	D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43333 all species →	2-HACID_DH_C DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12972	ghrA; glyoxylate/hydroxypyruvate reductase	EC:1.1.1.79 EC:1.1.1.81	Glycine, serine and threonine metabolism	ko00260	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.