Gene detail

Detailed information of gene11231.t2 in Actinoscyphia liui

Genomic Location: chr3:31869033...31879709
NR annotation: KXJ11598.1, Enhancer of polycomb-like 1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene11231.t2

ATGAGTAAGTTATCCTTCCGAGCCCGTCAACTCGACGCTAATAAGCCTCTTCCAGTCTATCAGGCCGATGAACTGCAGGATCTGTCCGAATTCAGTACAATAAACCGAGCAGTTCCTCAAATGCCGACTGGAATGGAGAAGGAAGAGGAATCGGAACATCATTTACAAAGAGCCATTTCAGCACAGCAGGTTTATGGAGACACTCAACAGCTTGTTATTCCAACTCCTGACAGTGAGGAAATGAAGTCTGTTCCATCTCTGTCACGGAATAACTTCAAGCAACCCAAGCAGTACATCCATGTACAAGCATATGGATTGAATGAAGATGTTCCAGAATATGACTTGGACACTGTGGATGAACATTGGCTTGAAGGGTTCAACAACAAGAAGGAAATGCTTACAGTTTTGCAATTGGAAGTAATTCTTGAAAAACTTGAAAAGGGTATGGGAGCTCAGGGTTGCATGACATATGGTGATGCCAAAGCATTGCTACAAGAAAATGAAGAAATTGTCAAACCTGTTTATGAGTACTGGACCAACAAGCGTGAGAAGTTGGAGGACTCTTCAATCTGTCTGATTCCACAAGTAAGAGGAGAGAAAAGAGATGGCACAACAACGAATGACCCTTATGTAGCATTTCGAAGAAGAACAGAGAAGATGCAAACAAGAAAGAATCGCAAGAATGATGAAGCAGGCTATGAGAAGATGTTGAAGCTGAGAAGAGATCTCAAACGAGCTTGTACTATCTTGGACATGGTGAAACGACGAGAGCAAACCAAGAAGGAATTACTAGAATTGACTGTAAATGTGTTTGAGCATAGATATACTGCTGGGGACTTTACTGGCCAGATACTTCAACAGTGTCTAGATCTGATTCGATATCAACCTCCTGCGACCAAGCTCACTGTTCCTTCAACTATGCATGGTGATAACCTTACTCCTGGGCCCAATATTGATGTGCAGAGAGACATGGTAAAAACTAAGCATGAGGAAGCAGCGAACCTGCGAAATGATTATATTGCAACTGGCCATAGGCGTCCTAAAGGTCTTAACCATGCTAAAATGAGGCACCGCATATCAGTTGATGGCCAACCCATATTTAGTGATAATGACGAAGAGGCTGGACAACTTTCCCCATCACAACTGGAATTGCCATCAGAACCGGATGAAGATGAAGATGATCCTGACGGCAGATATGCATTCAAGAGAAAAAAGGGCGTCAAGTACCTTCCGCCTCGATTCGACTCACCGTTACCGTACCCATGGATAGATCCTTCGGAAGGAGGTCTTGGGGACAAACGATTCCGGTATTGCTGTACATCCATCTCGTCACCACAAAGACTTATTGGTTTCGCCAGACGGAGAAGAGGTCGTGGAGGAAGAATATATTTTGATCGAGCCCGGACACCTATGGCAGAGAACCTAGAAGACTTAGATTCATTATTAAATTCATCGATTTCATCATCACTTAGTCTTCCTAATGGACTATTCCCTTATGACCATTTAACTGGTTGGAAGAAATTGACAATACCTCATTATCGACCGAAATCCCCTACGAAAAGTACAAGTCAACCGCTCTCATCACAATCGACTTCATCACATGATCAAAATTCTGGACTTCAAAGTAGTTCAAGTGGTCAGCCTCGACCTCGTATTCATCGGAGTTTCTCAACGCAACCACGATCGAAATTCTCATTAAATACGTCACCGACTAATGGACTTGTGGTGACGAACTCTAATCATAACGATTCTACGACTGTTTGTACGAACAGTCGAAGTTCGTTACCTAATGGACCACTTGTAACACAAAGTATTTCTCACGGTACATGGACTAGTAGTTCTGTTAGTGTTACACACACTAAAAATGCGTATTCTACGGCGCCTATCAAGGCTGTTTACGCGCTCAACTTTCCACTAAACTCCAGTACATCCAGTCAGTTGTTGTCAACCAGTCTCGTTCGTGGGAATGCGCCATTTTCTCCAACATCGACCAATTCACCGTCATTATTAAGTACAACTAAAACATCGGCCAGCTTTCCAAACTTATCGGCTACAACAAGTGATTTCGATAGCATATCAAATATTGGAAGACCTGAACCGTTTAAAAGACAGAACAGTATCGACGTCGTAAATGCTACATAA

Transcript

gene11231.t2

GCCATGATGGATCCGAGAAATTGGGATCCCAAAAAGAAAAAACACTTAAATTCGTCATAGATGACGATTTAACTAAATAACAACCACAAAATGTGCTAGAACAATATTCCAATTAACTACTACGGACAATATTATTCCCCTGCACTTTTTGTGCAGTGTTGTAAATTTCAAGTTTGAGTGCCGCACTCGGTGAGAGGAATCAACAAGATGAGTAAGTTATCCTTCCGAGCCCGTCAACTCGACGCTAATAAGCCTCTTCCAGTCTATCAGGCCGATGAACTGCAGGATCTGTCCGAATTCAGTACAATAAACCGAGCAGTTCCTCAAATGCCGACTGGAATGGAGAAGGAAGAGGAATCGGAACATCATTTACAAAGAGCCATTTCAGCACAGCAGGTTTATGGAGACACTCAACAGCTTGTTATTCCAACTCCTGACAGTGAGGAAATGAAGTCTGTTCCATCTCTGTCACGGAATAACTTCAAGCAACCCAAGCAGTACATCCATGTACAAGCATATGGATTGAATGAAGATGTTCCAGAATATGACTTGGACACTGTGGATGAACATTGGCTTGAAGGGTTCAACAACAAGAAGGAAATGCTTACAGTTTTGCAATTGGAAGTAATTCTTGAAAAACTTGAAAAGGGTATGGGAGCTCAGGGTTGCATGACATATGGTGATGCCAAAGCATTGCTACAAGAAAATGAAGAAATTGTCAAACCTGTTTATGAGTACTGGACCAACAAGCGTGAGAAGTTGGAGGACTCTTCAATCTGTCTGATTCCACAAGTAAGAGGAGAGAAAAGAGATGGCACAACAACGAATGACCCTTATGTAGCATTTCGAAGAAGAACAGAGAAGATGCAAACAAGAAAGAATCGCAAGAATGATGAAGCAGGCTATGAGAAGATGTTGAAGCTGAGAAGAGATCTCAAACGAGCTTGTACTATCTTGGACATGGTGAAACGACGAGAGCAAACCAAGAAGGAATTACTAGAATTGACTGTAAATGTGTTTGAGCATAGATATACTGCTGGGGACTTTACTGGCCAGATACTTCAACAGTGTCTAGATCTGATTCGATATCAACCTCCTGCGACCAAGCTCACTGTTCCTTCAACTATGCATGGTGATAACCTTACTCCTGGGCCCAATATTGATGTGCAGAGAGACATGGTAAAAACTAAGCATGAGGAAGCAGCGAACCTGCGAAATGATTATATTGCAACTGGCCATAGGCGTCCTAAAGGTCTTAACCATGCTAAAATGAGGCACCGCATATCAGTTGATGGCCAACCCATATTTAGTGATAATGACGAAGAGGCTGGACAACTTTCCCCATCACAACTGGAATTGCCATCAGAACCGGATGAAGATGAAGATGATCCTGACGGCAGATATGCATTCAAGAGAAAAAAGGGCGTCAAGTACCTTCCGCCTCGATTCGACTCACCGTTACCGTACCCATGGATAGATCCTTCGGAAGGAGGTCTTGGGGACAAACGATTCCGGTATTGCTGTACATCCATCTCGTCACCACAAAGACTTATTGGTTTCGCCAGACGGAGAAGAGGTCGTGGAGGAAGAATATATTTTGATCGAGCCCGGACACCTATGGCAGAGAACCTAGAAGACTTAGATTCATTATTAAATTCATCGATTTCATCATCACTTAGTCTTCCTAATGGACTATTCCCTTATGACCATTTAACTGGTTGGAAGAAATTGACAATACCTCATTATCGACCGAAATCCCCTACGAAAAGTACAAGTCAACCGCTCTCATCACAATCGACTTCATCACATGATCAAAATTCTGGACTTCAAAGTAGTTCAAGTGGTCAGCCTCGACCTCGTATTCATCGGAGTTTCTCAACGCAACCACGATCGAAATTCTCATTAAATACGTCACCGACTAATGGACTTGTGGTGACGAACTCTAATCATAACGATTCTACGACTGTTTGTACGAACAGTCGAAGTTCGTTACCTAATGGACCACTTGTAACACAAAGTATTTCTCACGGTACATGGACTAGTAGTTCTGTTAGTGTTACACACACTAAAAATGCGTATTCTACGGCGCCTATCAAGGCTGTTTACGCGCTCAACTTTCCACTAAACTCCAGTACATCCAGTCAGTTGTTGTCAACCAGTCTCGTTCGTGGGAATGCGCCATTTTCTCCAACATCGACCAATTCACCGTCATTATTAAGTACAACTAAAACATCGGCCAGCTTTCCAAACTTATCGGCTACAACAAGTGATTTCGATAGCATATCAAATATTGGAAGACCTGAACCGTTTAAAAGACAGAACAGTATCGACGTCGTAAATGCTACATAACTGACAGAGAATCAATAATTTTTAAAGTATATTTGTAATTATTAGCCTGTATACCTTGACACATACGTATTTCCCTCCATCAAGGGATATTCTCTGTACAGTAAACTATTTATAAGCAATTTTTCGGTAGGTCCCTCAGATGCAGTTTTTCAAGAACGTTTATTCGTTGGAAAGAATTTCGATAATTATGATGATTATGTAAATCTAAAAGTTCATCAGGAAGTTTAGGGAGATATTTCTTTTGCCCAGTTTTTCTGTAAAGTTTTGTATTTTTTTTTATTTTGTGTAAAAAATAGTAACTTGTCTAAGTTTTTTTCCTGGTAATGTGTTAAGAATTTAAGTATTGGGGATATAATTTTGTTATTTTGGCTTCTCAATGACTATCACAATACTAGGTGCAGTGCCCAAATAGCTGTAATCGCTATCACTTTTAGTTTAGCTTTCCAGATTGCTAGATTGTAGGGTTTGGTTTACCGCATACTTGTAGCGGCTACAAGTATCACTGGGACTATATTTAAAATCAGCATGTCAGAAAGTTCTCGCTATTCTTTTGGCTCCAGGAATTTGGGACTGGGTTTAGGAATTGTTGGAAAACTTATTATTCGTTTAATCTCGTAAAACCCCAGTGTCTTTGTCTGAAACATTTCCTTTAAATATCCATTTATTGTAGATTTTTTTATACACTAGTCAGTCAGTCGTTGCGATGTTTCTTTGTACGTTTTATAACAACAGTCCCCAGTAGTATTGTGTAATTCCGTGTGGCGATTTGGAAGTGGCAGGACCATTGCCTTAACCCAATAGACAGCATTGAGCTACTTAGTATGTTATTTGTATAGTGCGCTTCCCAAATCAGAAAAAACTTTTCATACCAAAATACACCACTGAAAGTAACGGTACAGTCTTCCAAAGTTGCATTGAAAGATCACAATTTTATCTTTATTTATTGACATTGTGTCCGCTATGGGCAGAACTGTTCATTCCAGTGATTCATAGGGCCACGTCTTACGAAATAATAATGAGACAAGGCTCATTTTAGCTCACCTTAAGGTTAGGTATACTTGTAAAGAAATTTTCTAATTGGTTCATTCACGAATTGATGTGAAGAAAGCGGATAATGGACAATGTATTGTAGTCCAATAGCGTATTTGTGCTTAATAAATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H2F5	Enhancer of polycomb homolog 1 OS=Homo sapiens OX=9606 GN=EPC1 PE=1 SV=1
Q8C9X6	Enhancer of polycomb homolog 1 OS=Mus musculus OX=10090 GN=Epc1 PE=1 SV=1
Q6DJR9	Enhancer of polycomb homolog 2 OS=Xenopus tropicalis OX=8364 GN=epc2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007043 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10513 all species →	EPL1	Enhancer of polycomb-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024943 all species →	Family	Enhancer of polycomb protein	Interproscan
IPR019542 all species →	Domain	Enhancer of polycomb-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14898 all species →	ENHANCER OF POLYCOMB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0032777 all species →	Cellular Component	piccolo histone acetyltransferase complex	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11322	EPC; enhancer of polycomb-like protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.