Gene detail

Detailed information of gene11246.t1 in Actinoscyphia liui

Genomic Location: chr3:32215149...32227446
NR annotation: KXJ12657.1, Monocarboxylate transporter 10 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene11246.t1

GTCTGGTCCTTTATCAGCAGCTGTAAAGACTGAAGTACAGTTTTGGACTAATCTACAAAAACGTCTCTGTTAAGGCCTGACGAAATACTGCAATGGACAAAGCAGAATTGCCCTTAACAAATGAAGACAAGAAAAAAAAGCCGGATTCCCAACTGGATGGCGGATGGGGTTGGATGATCTGCTTTGGCGCATTTCTTGTCCATATTCTAACCGTAGGGCAACAGAATTGTGCTGGAGTGATTTATTCTCAACTAGTAGATGAATTTAAAACGAAGAGAGCTGAAACCGCTTGGGTGACAGGCCTTTCGTCCAGCATCATGTATCTGTTCGCCCCCGTGAGCACGTTTCTCGGCGAACGCTTTGGATGTCGAAAAGTGGTTATCGCAGGTGGAATCTTGACAGCAACTAGCATGATTTTATCTTCATTTGTTCGACAACTATTCCCGATGTATTTCACATATGGCTTAGCTTGGGGAATTGGAACAAGCTTCGGTCTTTTCCCCTCGTTAATCATGTTAACGAAATATTTTCGACGCCGATTGGCGTTGGTCACCGGGATAGCTCTGACAGGAGCGGCCGTTGGCGGGGTTGCCCTGAGCCCACTGGTGCAGAAAGTGTCCATGAAATTTGGAACTCCAAGCATGTTTCGACTTTTAGCGGCTTTAAATGTTCTCATGATATTTGCTGGAATATTATATCGCCCGTTAAAAGATGAAAAAATGAAAAGAGATTTTGGGGGACATCGATCGTGGAAAGTTACCGTTATGGTTTTAATGAGACACAAGGGTTACATGGTCTGGATGATTGCGCTGTGTACTCTAATGCTGGTGTTTCTGGTACCGTTTGTTCATCTGGTCAAGTTGGCAGAAGACTTGCACACCGACAAAGAGAAATCTTCTCTGTTAGCAGCAATAATGCCAGCTGGTGGGTTCATTGGTAGCTTGGTGTTTGGACGACTTAGTGATCATCCACGATGCAATCGCATTTTAGCATGTCAGTTTGCAATCATGTCCATGGGTGTGGTCTGTACCCTTGTAACGATTGCTCCATCATACACGTGGCTATTGGTGCTAGCATTTGCTTTTGGTCTATTTGATGGTTGCTATGAGATGTTAGTACCAGTAATTACTAGTGACATAGTGGGCATTAAGCTTGCTCCTACTGCTATTGGCACCCTGTACTGTGTATTGGCTATCCCCAAGACAATTGGTCCGCCAGTGGCTGGGTGGATCTTTGACGTTTCGAACAGTTACAACACAGCGTTCTATGTAACTGGAGGACTGATGACACTGTCATCGATAATCATGTTCTTGATTCCAAGACATCACGAAGCTGTACGCACTGATTTGGCAGAATGGCATCAGATTAAGAATTCGGAATCGAGTTCGACATCCACCAACAGCCGTTCACCATCCATCGACAAAAAGCCCCCTCGGAGGAAACTAGGGGCGTTGGCTTGCTATACTTTACGGTTCAAAAACGATAAGACAAACGAAGACTATTACACAACCACAACACAAGATGTTCTACTTGTAACGGAGAAAATGACAAGCGTGTGACGTTACTGACTGCTGCACTAATACAATTAATCTAAAATCAACACGGTTGAAATTCATATACATTAGCATAACATGGATGGATTCAAAGAAAATTGCTGTCGAGAAAAAAGAAATAAGTCAAAAATTAAAACGAAAAAAAATAACTCAAAGAAAGAATTGAAAAAGAAATTAAAGAAAAAAAAAATTCAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAAGAAGAAAAGAAGGAAGGAAGAAAGAAAGAAAGAGAGAGAAAAGTAAACAAACAAACAAACAAAAATACAAATAAAGAAGAACAAATAACAGAATAAAGAATGACAGTGGAAAGGAGGAAAATACACACGAAATGCATCATTGTATGGCTATGATAAGCTTCAATGATAAGCTTAAGGTGAATGATAGCAAGACTGAGTTTATGCTCATAGGCACAAGACAGCACTTGGCTAAAGTGAACGTGATTAATGGTCTGCGTGTTGGTGATACTAATTTCAATCCAGTAGCTGTTGCTAAAAATCTTGGGACATGGTTTGATGAGAACATGAACATGGTGACCCATATTTTATATAAGAGTAAAGCCTCGTCTTTTGTATAACATTAGACATATTTAACTAGTATTTAACTAATGACACTACATAGATACTGGTTCATGCATTTATTACCGCTCGTATTGACTATTGTAATAGCTTAGTAAGCTTCAACGTATACAAAACAGTGCTGCTTGGCTGGTTTGTTCTATGTAGTATTTACAATATGA

Protein

Uniprot

Uniprot term	Description
Q503M4	Monocarboxylate transporter 12-B OS=Danio rerio OX=7955 GN=slc16a12b PE=2 SV=1
D4A734	Monocarboxylate transporter 12 OS=Rattus norvegicus OX=10116 GN=Slc16a12 PE=1 SV=1
Q6ZSM3	Monocarboxylate transporter 12 OS=Homo sapiens OX=9606 GN=SLC16A12 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08187	SLC16A10; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 10	-	Transporters	ko02000	deepkoala