Detailed information of gene11271.t1 in Actinoscyphia liui

Genomic Location: chr3:32518168...32525213
NR annotation: XP_020899344.1, NEDD8-conjugating enzyme UBE2F [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5M8Y2NEDD8-conjugating enzyme UBE2F OS=Xenopus tropicalis OX=8364 GN=ube2f PE=2 SV=1
Q5ZKX6NEDD8-conjugating enzyme UBE2F OS=Gallus gallus OX=9031 GN=UBE2F PE=2 SV=1
Q9CY34NEDD8-conjugating enzyme UBE2F OS=Mus musculus OX=10090 GN=Ube2f PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009302 (this species only) · gene tree & orthology
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR050113
all species →		FamilyUbiquitin-conjugating enzymeInterproscan
IPR023313
all species →		Active_siteUbiquitin-conjugating enzyme, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24067
all species →		UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for gene11271.t1 in Actinoscyphia liui.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10687UBE2F; ubiquitin-conjugating enzyme E2 FEC:2.3.2.34
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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