Gene detail

Detailed information of gene11295.t2 in Actinoscyphia liui

Genomic Location: chr3:32806017...32814514
NR annotation: XP_020903371.1, phosphatidylinositol 5-phosphate 4-kinase type-2 alpha isoform X1 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene11295.t2

GTTTTGACAAGTCGAGCAAGAAAAAGTGGGTTCAAATTTTGCGGGAAAAAGATGCTTTAACGTCTCCAAATTCCATCACAGAGACATCTTGCTGTTTCTATTATGATGGCTTCCACCAGTAAAATGAAAAAGAAGAAGAGATTCCGTGCAGTGAGCCAGAAAAGGAAGCTATTTAGGTCGAACGACCCTCTGCTCGGGGTGCTGATGTGGGGAGTGAATCAAACGCTCAATGAATTAGCACACGTTAATGTTCCTGTTATGCTGATGCCAGAAGATTTCAAAGCCTTCTCCAAAATACGTGTGGACAACCATTCGTACAACAAAGAAAATTTACCAAGCCATTTTAAATTCAAAGAATACTGTCCTATAGTGTTCCGGCACTTAAGGGAAAGATTTGGTGTCGACGATAAAGAGCTATCACAATCATTCCAAGTATCTCCACTTGTTACATCATCACCAGGTCGCTCTGGAACCAAGATGTTCATATCCAGGAACAAGAAATTTTATGTTAAAACAATTGAAAGTGAAGAAGTTGAAAGATTACACAATTTTTTACAAGAATACCATCATTATATTGTTAAAAAACATGCTGATACTCTGCTGCCGCAATACTTAGCAATGTACAGAATAACAGTGGAGAGTAAAGAAACATATGTCCTTGTCATGAGAAGTGTGTTTGGTAGCACATTAAAAATACACAAGAAGTATGATTTAAAAGGTTCAACAGTGGACCGGCAAGCAAGCAATAAAGAAAAGTCAAAAGACACACCAACTTTTAAAGATAACGACTTCACCAAAGACAATGTTAAGCTAACTGTTGGTGATCCAGCGAAAGCTGCTCTTGTGGAGAAAGTCAAAGACGATGTCGAGTTTCTCACAAATTTAAATATAATGGACTACAGCCTGCTACTCGGCATTCATGACTGCGATCTTGCAGATGCTGGAGATGATGAAGATGAAGGAGTTGGCGATGAAAGCAGATATGAAAGTAATGAGGAATTAAGCGATGCTGATTCGCCTCAGGAAGGAGAGCTATCCACATCTCCTCCAGACACTCCACCTGCTACTGACGAGGACAGATTTCGCACTTTGAGTATGGAGAGTGAAGACAAATTTGAAGAAAAAGATGAAAGTGATTTTATCTTTTCAGTACACAGTGCTGAAGGGTGTAGAAGAGAGATATATTTCATGGGTATTATTGATGTACTGACATATTATGGTGCTGGAAAGAAGGCCGCTCATGCTGCGAAGACTGTTAAACATGGGCTCTCAGCCTCAAAGCCATGGAGAAGAGTGTCAGTAAATCATAGTGAAGGCAATGTGGCTCCCAATCAACATTGGGCTGGTGCAGAGATTTCTACAGTCAAACCAGAGAATTATGCTAAGAGATTTCTTGAATTCATTGATAGGATAGTAGAATAGATATATACATACCACTTCTCTTGTTAATTCCAGAATTTATAAAATTATTCTGATAGCATATAACTTACTTGACTGTCTAATAGTAACACATAAATGGTGACACAGTGGAGTGTGTGTACATATTTTTTAGGATGCAAAGATTGATTACAGTAGATTAGAACAACCTTTCCTTGGAAAGTCTTTCCAGTCTATCACTAATTTTGTTTGTATGAAAACCCTGCTATTTCAAACTATTTATTGTTCCGCTTGAGGTTTTGAGATAACAGACCTCTTACTAATATTAGTCATTGCTACAAAGTGCTTACTTGATTTGTAGTACAAAAATTCATTAATAATTCATGAGAGAAACATGTCGTGTTTTTAAACTTGATAAAGTGCTCCTGCTTGTTTATTAAACAGTACATAAAGATCCCCATGTATTTCACTTTATTCTCACTGTCCTAACTGGCATTAATACTTTATTGTAATATTACATATTAAGCAGGATCGCATGTACATGTATTTATGGCTCTGTATTAGTTGACAGGTTACATATAAGGGTGTGTTCATTTGACCCTGTTCCAGAATAGGAATACATGAAATAATCACTTGATTAATAATCACTAATCGTTCACTTAAGCACAATTTAACATTCCAAACTATTTCAGTACCTTAAGTTTATAAGAATAAACCAAGGAGTCTATTGCGTGTTCAGTGGAGAACAGCTACTTTGGAGCGATTTAGGGATGGTACGGTATTCCATGTATTCCTATTCCGAAATAGGATCAATCGAATGCACCCTAAGTTGCAGCAAGAAGTCAGCAGACATTGGTCAATCACATCCACAGCAAGATTTGTGTCCACCTTCAAACTAATAATGACTTGTACATGTATGTACTATTTTGAATTGATACTTCTGTTCATGGCAATACCAGTTTCTATGTTAAGATATCAATAATATTCCATTTTACAGTTCTATTCAGTGACCACG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F356	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Gallus gallus OX=9031 GN=PIP4K2A PE=2 SV=1
O70172	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Mus musculus OX=10090 GN=Pip4k2a PE=1 SV=1
Q9R0I8	Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus OX=10116 GN=Pip4k2a PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004984 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01504 all species →	PIP5K	Phosphatidylinositol-4-phosphate 5-Kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023610 all species →	Family	Phosphatidylinositol-4/5-phosphate 5/4-kinase	Interproscan
IPR002498 all species →	Domain	Phosphatidylinositol-4-phosphate 4/5-kinase, core	Interproscan
IPR027484 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 5-kinase, N-terminal	Interproscan
IPR027483 all species →	Homologous_superfamily	Phosphatidylinositol-4-phosphate 4/5-kinase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23086 all species →	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016308 all species →	Molecular Function	1-phosphatidylinositol-4-phosphate 5-kinase activity	Interproscan
GO:0016309 all species →	Molecular Function	1-phosphatidylinositol-5-phosphate 4-kinase activity	Interproscan
GO:0046854 all species →	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0046488 all species →	Biological Process	phosphatidylinositol metabolic process	Interproscan
GO:0052742 all species →	Molecular Function	phosphatidylinositol kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00920	PIP4K2; 1-phosphatidylinositol-5-phosphate 4-kinase	EC:2.7.1.149	Regulation of actin cytoskeleton	ko04810	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.