Gene detail

Detailed information of gene11391.t1 in Actinoscyphia liui

Genomic Location: chr3:34079379...34108943
NR annotation: XP_020913069.1, protocadherin-like protein [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene11391.t1

ATGGCAATGTTGGATAGTGTACTCATTTTCCCCTTGATAATGGCTTCGCGTTGGAAATTGGTTGTTATTTTCATGGCTGTGCTATGTTACGTTCCGAGTGAACAGACTATTATTAAAGCTACTGTACCCGAGGACAAACCCAGTGGATATGTTGTGTATCGCTTTGAAGCACCGCCTAGTGGAGAAATCTTCCAAGTGTACGATTCTAGATACACCGACTCGCTTGAGCAGCTCAAACTATTCGATGTTTCTGAATCTGGTGTGTTATCAACGAATCAGCCATTAACATACCACCATGATGGGAAAAACACGTTTGAAATCACGGTCGTTCGACGGAAACGCGGCGAAACTTCGGGGGGAATTGCTTACACTCTTCAAGTTAAAATCACCGATACAAACAATTATCTGCCGACGTTTGGGTTCAGAATCTACAATGGGACGATTTGGGAGAATTCACCTCCAAACACAAAGGTGAAAGGAATTGTAAATTGCCATGCGGAAGACAAGGACTCGTTTGGTTTCAAAGGCTTCGCAATTACTGATGGCAACGAGAAAGGGTATTTCAAGTTAGAAACTCTCCAAGTTGGCGCGAATGAGAAGTTTTTGGAAGTCAGGACGACGAATATCCCGGTTGTGAAAACCAGTAGTAAAAACGAGGAAATTACACTCGTCGTCGAAGCAGAAGACAATGGCGTCCCAAACAAAAAAGCTATCACCAAAATTGTAATAACAGTTTTAGGAATTAATAAACATGTACCGAAATTCGAGAAAAAACATTACAAAGCTAACGTCAGCGAAGAGATGCAAATTATGTCTACTGCGGTAAAGGTTCACGCAGCGGACAACGATGTTGGCCGAGATGGAAGTATTTATTATACACTAAAACCGCAGTCGAGTTACTTCACAGTCAATCCTGTCAATGGCCACATTGAGTTGATTCGTTCTCTGGACTACAATGTTAAAAAGCTGTTTGATTTAACGGTTTTTGCTACTGATAGAGGCGTTCCCTCCAAAGAATCGTCTGCTAAAGTTACTATTAGCATACAGAAAGACGTGCCACTCTATCCACCACAGGCAGCCCAACATCCAGGCAAGAACACTGCTCCTAGTTTTATGGCAGCTGTTCTTGCTGTTAATGTCCGTGAAGATTTACCGTTGGGTTCTTTTGTAACTCTAGTACGTGCCACTGATAACGATCCTCCCGGTCCAAATAGACAACTAGTTTACAGTTTAACTGGTAATAATGCAGATTGGTTTAAACTGGACACAGACACTGGCTTACTGACACTTCAAAAGAAGTTAGACTACGAGTCAGGACCAAAGCTGTTTAACTTTACAGTCAAGGTTACGGACAAGGGTTCTCCACCATTGTCAACGTCGACATCCTTGGCCATTTACGTGATGGATGTAAATGAGAACTATAATCCACCAATCTTTGAACCCGCTGTAAGGTTCCTAAAACTACCCGAGGACACCCCTATTGGAAAGTCAGTGCTCACTGTTTCTGCCACCGACAAGGATCCCGGTCCTGATGGCAAATTGGTTTACTCAGCGATCTCGGGCGAGGGTATCAACTACCTGAACGTCGACGAGAAGACTGGAGTCGTGACTACTATAGAGTATCTTGATCGAGAAATGAACCCGCACTTTGAAATCCTGATTGCAGCACACGACACAGGAAACTTTCCGATCAGATCACGACTCTACCTTGTGATCGAAGTCGAAGCCGTTGATGATCTGTTCCCTCAATTTCTAACCACTGTGACCCGTGCTACGGTGCCCGATGGATCCCCTGAGAATACATTTGTCACGGTGTTACATGCTGTGGACCTGGACAGTCAGGGTCTTGTTTACACCATTAAAAACGCTGGTGTGAATGACCCATTCAAGATCCAGACAGATACAGGGGTGATTCGAACTCGACGCGCTTTGGATAGAAAGGCTGGTGATAAAGAGCACTACCAGTTGACAATCCAGGTCCAAAATGGACCAAGAAAAGCCCAGGCGTTGGTCGACATAACGATAACCCAATCCGGTAACGTTGCTCCACGGTTTACCACGAGTTCGTATTCACTTGCTGTCAAAGAGAATATGGGGAAGATTGACAGTTTAATTTGTCTAGCAGCAACCGACAACAGTGATGGAGTGATCAAATATACCATAACTACTGGTGGTACTACGACCTTTGCAGTGGGAGAAACATCAGGGAAATTTTCCATCTTAAGATCGTTTGACTATGAAGTGGAGTCGGCGTACGACGTGGACGTGCAAGCATCTAATACCAACAAAAAGACCGCTGTGGCTTCGATAAAGATTAGAATCACCGATGATGATGACCGTCCGAGCTTTAAGCAAACAAAGTATGAACTAACAGTCAGCGAGGACACTGCGCCAGGGACAACTCTTTTAACAACGATAAAAAGTGGCTTCGAATTCCAAGACGTAGACTCGAGCCCAGACCAGTACGAGTGCTCAATGAAGGAAGTGACGTCATCTTATGTTATAGATCACTTCCGGCTCGTGCGCGTAAAGAGAGAGTGTTTCTTGGTGACAAAGAAAGCCTTCTCGTACTCCAAGGAGACACAGTTCCGATTTAACGTAACGGCAACCAACAAAGACTTTCAAAACATGTATACTTCTTGTTCCGTGGTTGTGACCATTAAAGATGCTAACAATAACGGCCCAGTATTTGAGCAGGACGACTATTGGGTGACTGTGTCTAGTGATACCTATGTAGACACTTCCATTCTACAAGTGCAAGCCCCAGACTTGGACCGAGATGCCAATGGTCGGGTGTCGTACCAGATTTTATCCAGTGGGGCGAGCAGTAAAGTTAATGGCTACTACAGGTTCTTTATCGATCCAGACAACGGCGTGGTAACCACTACAAAATCTTTACTTCGAAATCAACTATACGCTTTTATTGTCAAGGCAACAGATAAAGGTTCTCCAGTCAAAGAAAGTCAAACATCGGTCAGAGTGTCTGTCTACAGTCCAACGAGTACTCCAGTGAAATTCCAAGAGCCGCGATACACTAAATCCATACTTGAATCAGAAATCATTGGTACTAAAGTCACTAAAGTCCAGGCCACTGGTCCTGCGGCAATTTCATATTCTATCGTCGGTGGCAATACTGGTTCTCGATTCCGAGTGGACAGTGGTTCAGGACAGATTGCTTTGAACAGAGAACTGGATTACGAGACCAAGAACAGTTACAAGATCGCTGTACGGGCTACCTGTGCTACCACGCCCAAGATGGCTGCCGATGTGATTGTTGAGGTGACGGTGACGGACGTTAATGATAACCCACCTAAGTTTGTTCTTTACCAAGATCCTGAGGTTGTGGTTATCAACAGTTTTACTCCTAAAGATACCAAGATATTCAAGGCTATAGCAGAAGACCCAGACTCGAGTAAATTTGGTCCTATTATATACTCTATCGACGCTTCAAAGAGCCAGCCAACAAGTAATCTACCGTTCAGTATTGATAAAAGCAACGGCGATGTCAAGACGTCCAAACTCGTAAAATATTCAGATAGCTCCAAGTATAGCGTCGCTATAGTAGCCACAGATGCAGGTAGCAAGACTGGTTCTATGATATTAACAGTCAATGTGATGGACGTCAAAGCACCACCAACGTTTCCATCCAAGAAATACACCTTCACGCCAAAAGAAGATATGCCAATTGGTTACGAGGTTGGAAGCATACTAGCTACATATGGAGACTCTACCCAACTTTTGAAGTATTCCATCACAAGTGGAAACAAAGACAATACATTTTGCATTAACAGCCAGGGAACGATTTCCACAACGAAACAGCTGAACAAAGAAACGGCGGAATCGTACAAACTAAACGCCGAGGTTGCACTTGGTGAACATAGCGATACAACAATTGTACAGATCGATGTTGTAGACGTGAATGACAATAGTCCTGTGTTTGGGAAGACCGTGTACACCGTTGATGTTCCAGAGGATGTAGCCGTTGGCAAGGAAATGGTTCAGGTAGTTGCCACCGATAAAGACTCGGGCTCCAGTGGCGAGATTTCTTACTCCATCACCCAACCCGTTGAAGACAGCAGCAGTAAATTGTTTACTATGAATGCTAAAACTGGAGTAATAACTTTGAAAGCGAGTCTTGACCATGAATACATTCAGCAACATGTTTTGTATGTTACAGCTGAAGACAATGGCTCACCAAAACTTGCAGCCATGACAAAAGTGGTCGTGAACGTGAAAGATGTTAATGACAATGCACCAAGATTCTCCACCCAGTTATTCATAGCTACCGAATCAATCAACGCCCAGCCTGGAGATCACGTGATTCAAGTATACGCGTCTGATGCTGATAGAGGGAAAAACAGCCAGCTCATCTTCTCTATTATAAGTGGCAATAACGAAGGCCTCTTTGCCATCAACGAAGAAAATGGTCTCGTTACAGTCCAAAAGCCTCTAGCGACTGCTCAGCAGTTGAAATTAAACTTGACTATCGGAGTGAAGGATCATGGGAATCCACCTCGAACGGGAACCTCTTCTTTGTTAATAACGATAGAATTACGCGATGTCCCTCCCAAGTTCACCGTCAAACCGTTAGTTGTATACGTTAAAGAAGGAATTCCTCCTGGCTACCGTGTTGCAACAGTCCGTGCATCAACATCGGCGCTACTTAGTTTTAGTATTGTGTCAGGCAATGATGGCAACTACTTCACATTGGACTCTCTTTCCGGTGTCATCATGGCTACTAAAATGCTCGATTTTGAAACAAGGAAACAGTATCGGTTAGGAATCACAGCGGTCGACTCTAAGGGCGATGGTGACAAGGTTACCTTGGTGATCAACTTGATTGACATTAACGACAGCCCGCCTATCTTCCCAGGGGTTGTGAATAATGTACTCGTCAAAGAGGTGGAAGGAACATCGATCTTCGCCAACGACATTGTAACAAACGTCGCCGCTTTTGATCAGGATATGAATGATAAAATAACTTACGAAATCTCCTCAGAAGGTCAAAAATACTTCACAATCGACAGCGATGGCAATCTAATTGGCATTAAAACCATGAAATCCATATCTGAACCAATCAAGTTCGAGATAACAGCACGTGATTCAGCCAATCCTCCTCACGTGACCAAGGCAAAAGTTACAGTTGAGTTTTTGAACCAAATCCCTGGTCAGCAACCGCTTCGGGTCTCAATACGTGAGGACACCAAGATTGGAACCAAAATCGCGACAATTCTTAAATTTTTTCCCATCGGACTCTTCAAAATTATCAATCCACCAGACGCGCCATTTGTTGTTGAAATCTCAGGAGTAGTGAAACTATCAGGAAAGATTGATTTTGAAAAGAAAGTTTCGTATGTTTTAACAATACGACAATTGGAATCTAGCACTCCAGGAGCAAGGTACGTCGATCAGCTTCTTGAAGTCTTCATTCGTGATGTGAACGACAATAATCCGAAGTTCACAGTTTCCGTTAGGTATGGACATGTTAACGCGAATTCCCGTGCCGGTGCTAATGTACTCCACGTTAGCTCCTCCGATGCAGACAGCACAAGTAATGGCGTAGTTGGATACCAGCTGGATCCCAAGAACCAACCGTTTGCATTTAACCCCATTACCAATGAAATTGAAGCCAGTGGAACCCTGGATAAATCCCAGTACGAAGTCAAACTGTCCCCTTTCGATCACGGTCGCCCTAAACGGAAAGATCCTCCGTTGACATTCAACATCGACGTAGCTCAGGTGCCACCATCCTTCATTGGGCTGACAGGAAATCACTACAGGTTCACGGTGTCTGAGAACGAGTTGCCTGGGAAGAAAATCGGAACTGTGAATGCCGTGAGTAGCTCAGGCGTACATGTTGCTTATTTCATTGAAAGTGGGAATGTAAGAAACAGTTTTATGATGAACAAAATGTCAGGCGGCATCCACCTGAACTATATCCTGAAATACGAGAAGCACGACAGGCTGTATAACCTTACTATCCTTGCAATTGAGCTCATTCCACGCGGTTTAAAAAGTCGCATTAAAGTGAAGATTGAGCTGTTGAATTACAACGACTATTATCCCGTCTTCACCAAAATGGTTTACCACAAAAGCGTTCAAGAAAATTTCCCTATCGGGAGCTCGATTCTCAAAGTGTCCGCCACAGATTGTGACTGTAGCAAGGACTGTACTTGTGAAGTGGGTCAGCTGAAGTACAGTCTGAAGAACACGGATCTGTTTTCAATAGACGCCAACACCGGTGTCTTGTCGCCTGCAAAGACATTGGACTACGAAGAAGTGACTTGGTCTGTTTTCAAGGTTTCTGTTAACGATGTTGGGGATCACACCAAGAACTCTAGCTCCTTTGTCAATATAACACTTACAGGCGTGAACGATAACGCCCCACACTTCCCACACAGCGAGCAAGTGTTTGGTATCCACGAAACCGCAGTGGTTGGAAAAACCCTCGCTTATGTCACTGCGAACGATAAAGATAAGGATGAGCTGACTTACACCATTGAGGGAGACAGTGGACCATTTACAATTGATAAAAACGAAGGCCTTATATCCCTTGTAAAACCTTTTCCTGTAGTCATTCCTGACTGGAAGTACACGTTCGACGTGGCCGCGAGCGATGGATTAAGTAAAACAGTGGTGAGAGTAATCATGAAGATTATCGACCAGAATAACAATAAACCACTGTTCACAGTTTGCAACGCGACAACTTTGCAGGAGAATATGTTTCCAGGGCGGAAAGTCACTCAAGTCAAGGCAACTGATAAAGATACCGGTAAAAACGGCGAGGTGGAGTACTTTTTAGCGTATGGCCAAAATGACTTCAATATTGACAATACTACAGGGATAATCACGACGAAGTACAGCCTTGATCGTGAAAAACGGAAACGCCATGTGATTGTAGTAAGAGCTGAAGATGCCGGTCATGATGCCGATGCCGATGAACGATTATCGTCTTATTGTGTGATACGGCTTAAGGTCTTGGATGTCAACGATAACTACCCCGAGTTTTTGATCCACAGATACCACGCCAGTGTGTATCAACAGTCCCCTGTAGGAACCGCCATTATGAAGGTGTCTGCCCATGATAGTGATCTAGGAGATAACGGACATGTGAATTACGCGCTAAAGGAAAAAAGTGATCTGTTTGCCGTCGACAAAGAGTCTGGTTTAATGACGACCACAGCGGACCTATCCGCACTGAGTGGGTCCTACGAGATCAACGTGATCGCCTCGAATACCATGCCTATGGCTGTGTCAGGGATCGTGGATTCATCACTGAACAAAGCTTCTGTGTTCGTATCGATCACCACTGAAAAACCACCCGAGTTTACCAAACATCTTTACAATGCGAACGTACCCGAAGATTGTGAGGTTGGCACGACTGTCTTACAAATCCAAGCCAAGTCCATGAACAATCGTAAGATTATCTACGAATCGCTGAATGAACACCCGGGAGCTAAACAACAATTCAGCGTCCAACCAACCACAGGTATCATTGTGACATCTACCAAACTTGACCACGAAACGGAACGTAATTATGAACTACAGTTCAGAGCGACAGAGACAACCGGCTCATATGTTCTCTTCTCAACTTGCTTTGTAAACATATCAATCGTGGATGTGAACGACAACACCCCAACGTTCACTATGGAAAGGTACGAAGCCCGAGTCATGGAAAATTCTCCAAAAGGCACACCCGTTATCAAGATAGACGCCGAGGACGTGGATCTAGGAAGTGCAGGACGCGTGACCTACAAATTCGCTCCAAAGTGGGACTACCAGTTGTTTACGATCAATAGTAGAAACGGACTTGTTCGCACGAATGCTGAGTTCGATCGTGAGAGAAAGAGTCGGTACTACGTAGAAGTGACCGCGTCTGATCAAGGAACCCCGCCTCATTCGACGCACACGTACCTTGGTGTTTCAATTATAGACCGCAATGATCAAGATCCACAGTTCCTCAACAAACAGATGACTGTGTCTGTTAGTGAAGACACAGTTGTTGGAAGCGCTATCTTCCAGTTAAGCGCAGTGGACTACGACGTTGGTAAGAACGCACTCATGTACTACTTTATAAGCGGAGGAAATCGCGACCACATTTTCTCGTTGAAGACGGTCATTACACCTAAGAACTACGCGGAAGTTATATTGGATAAAAAGCTAGACTACGAATTCAGGAGAGAATTCAAACTGCGTATTTCTGGGGCTGATGGAAAGACCAGTGACTTTGGCTACCTCACTGTAAAGGTCACCGATGCCAACGATAACGCTCCGTTGTTCAATCAAATAGCTTATTATGCTATTATCAACGAAGAGACCAAAGAAGGTGTGCCCGTACTTACAGTACGTGCTACAGACATTGACGGTCCACAGACTCAGAGCCCTTTGTCCTACTCCCTGGGTGATACGGGCAAAAGACACTTTCGTATAGACTCGTCTACCGGGGTTATTTACACCAGTGCACGAATCGACCGCGAAGCGATGCCATTTGTATTTTTCATGGTTTTTGTGTCGGACGGGAAACATACTGGTTCAGCAGGGGTTAAAGTTACCTTTAAAGACATCAATGACAACGCTCCTGTCTTTCCCAACCCACCGTACTACGGCTTTGTTAGCGAGAATTCTGCGCCGGGAACTGCAGTGATGATAATACAGGCTGTTGACTATGATGACCCCGACGCTGGTGGTAATACCCACATTGAGTATTCCTTGGTTGACAGCAGTAAGAATAATTTCGCTATTGACAAGAGCACAGGTCAGATTACCACGCGTGCAGTGTTTGATCGCGAGGGAATATTCAGCAATTACTCCATTGAGGTTCGTGCATCAGACAAGGGCAATCCCTCGCTGTCAAGCACAGTTCGCTTCACCGCCTACATCTACGATGTGAACGACAACAAACCACGATTTACGGACACGTTTTTCTACGGAAAGGTTTCGGAGGACGCCCCGCAAGGAACCATCATCACGCAAGTAACAGCTCTCGATGAAGACCAAGGAATGAATTCTGAATTCGAGTTCAGAATAACTGCAGGTAACGATCCTTATGGATTCTATATCAACCCATTCACGGGGGACGTCGTCGTGTCTGGTCTCCTTGACTTCGACAAGAAGAGGAGTTACAATATGACAGTTACTGTTTATGATAGGGGAATGCCACCATTGTTAGCCGATGAACCTGCTTACATCATTATTGGCATTCAAGATGCCAACACCCACCCCCCGTTCTTTAAAAATAAAAACTACAACGTGGAACTCAGAGAAGACGTTGCCATTGGTTACCAGGTGGTCGTGTTGTCGAGTTTAGACAAAGACCAGAAAAGCACCACGAAGAAGCTGAACTACGAGATAACGAGCGGGAATGAGAAGGGCCTTTTCGCCATCCAAGCCAATAAGGTGGATTTCTTCCAGGGAGAGATCTACACAATCGCCCGCCTGGACCGCGAGGACATTTCAACATTCACCTTGTTGATATCTGTTACGGACGAAGTGGAACAGAATGGTACTTGCACTGTAGTTATCACTGTTGTTGATGTGAACGACAACGGTCCAGTATTTCAACCTTCCTACTACATGGCTTCCATCAAAGAGAATTTCAACGCTGAGCAATTCGTAGCAACAATTAAAGCAGTTGATTCTGATTTACCAAGCAACGGTCCGCCCTTCACATTTCACCTCGTAAACACAACGCTGACCAACAGGTTTAGGTTTAAAACCTCCACTGCCACGTCAAGCTCCGTACAGCTGTTTGCGTACGGTTTGTTTGACAGGGAAGAAACCGCGTCGTTTCAACTTTACGTAAAGGCAACGGATAGCGGCACGCCTGCCATGTCCAGCTATGCATACGTGTTTGTGAACGTCTTAGATCAGAATGAACACGAACCATTTAACGGTGACATTACGATCATTGTCAACGGTCTGGATGGGTTGTTCATTGGGGGTGCCATCGGTAAACCTTACTACAAAGACGAAGACTTTACTGGCGATATTAATACTTATGCCATCACTAACCAATCACCCGGTCAGTACTTTACCATTAGCACCGACAGTGGAAACATCACTGCGGCTAAAGACCTGCCGCTTGGTACCTACTCTGTGGTAGCATCGATAACAGAAAAGAACGCGCGAATTGGGAACTCAACGAATTATCCAAAGACAGTGACGTCAAACGTTAAAGTCATCGTCCGCAATGTCACAAGGTCAGCGGTCGATGCCAGTGTCACACTTCGTTTATCCATGCTACAAGTAGAGTATTTTGTAGGCGATTATTATTCCAAGGTTGAGCTTCTTCTTGCGAGTCTTTTCGCTGCGCAACGAAGCAACGTTTTCATCTTCAGCATTCAACATGTAATGGCTTCACTTCCTACTGTTGACCTACAAATTGCGATCATGGACAACACGGAAATGTTCATCAGTACTTTTGTAATCATGTCTACCATCACAAAACAACAAAGCACTTTCCAAGATGTTGAAATCCACTTAACAACACCACCACCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCCCATTCAGAAATCCACTTAACACCACCACCACCACCATCACCACCCCATTCAGAAATCCACTTAACAACACCACCATCACCATCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCCCATTCAGAAATCCACTTAACACCACCACCACCACCATCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCCCATTCAGAAATCCACTTAACACCACCACCACCACCATCACCACCCCATTCAGAAATCCACTTAACACCACCACCACCACCATCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCCCATTCAGAAATCCACTTAACAACACCACCATCACCATCCCATTCAGAAATCCACTTAACAACACCACCACCACCCCATTCAGAAATCCACTTAACACCACCACCACCACCACCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCACCCCATTCAGAAATCCACTTAACAACACCACCACCACCACCACCCCATTCAGAAATCCCGTTAGCACTTCGTATTTTTGTTTCTAACGAAGGTCCTCGTTTGAACAAGTGTTTGCTTTGTGTAACAACAGGTCTATCACTTAGTGCCGTGGGCATCGATATGTGTAAGGGGACAAATAAACAGATTGGTGCCTGTGTTACTCAAACCGTACCATTTACCTCGTATCGGGTAGCCCCTGGTGACTACGGGAAAGTTCCTGCTCCGGCATCATCACTTACAATCGTATCTATCGATGTTTCATTGAGAGCGCTGTATCTACCTCTGATTCCTGTAACTCCTACATGTGCAACTAATAATCCTTGTCTTAATGGTGGAACGTGTCACGATGTGATGCCATCAGGTGTTGTGTGTCAATGCAACCCAGGTTTACTTGGTCCATTTTGTCAAGAAACAACCAGATCATTCAAAGGAGACTCCTACATACATTTAACCCATTTGAAGACCGTTGCTTGGAGTGTAATAGAATTTCAGTTTATTACAAAGGAAGCCAATGGTCTTATGTTGTACCAGGGGCCTACCACTGAAGTGGTAACAGGTGGTACTGAGGACTTCCTGGCCATACAGCTGGTACAAGGCTACGTCCAGGTAGTCATGTCTTTGGGTGTCGGGCCGCTTTACCTCAACATGACACGTGGCAAGAAGTTGAATGACGGTGAATGGCATGACGTGAAGTTAGAAAGACAATTATTGAAAGTAATGCTGACAATTAACAACTGTGACCAGATGCCTATCGTAGTAAAACCTGATGGCAGTATGGAAGAAGACAAACAGAACTGTCAAATCGAGGGTGTGATTCCAGGAGACGATTTATACCTTAATGGTAACTGGCCACTCCAATTGGGTGGTGTCATCAATCCAAGTCTCAAATACCCACCCCTCTCCTACACGGGCTTCGTGGGATGTATACGCAACGTTCTGGACTCGGGCATGATGTACGACTTGAGTAACCCCCTCGTGGAAGTCAATTCAGCGATAGGTTGTGATTTGGCCAACCGATGTCCAAACTGCAATAACAATGGGTACTGTGAACCACAGATGAATAAGCCAAGCTATTGTGTGTGTAACCTTGGGAAAACAGGAGCCATATGTAAAGAAACCAGTGAAGGATACTACTACTTGGCAAATAGTTTTACGATGTACACCAGCACAGCATGGTCTTCAACACCGTCCAGTTGGCTATTATCGCGGTCGTCGTCTTCAACAATGTGGACGCCGTCATCATCTTCATCATCATCATCTTCGTCATCATCATCTTCGTCGTCGTCATCATCTTCTTCATCGTCCTCATCATCATCGTCCTCATCATCTTCGTCGTCCTCATCATCATCGTCTTCCACAACACCTATAAAAACCAGAAAACTCAGAAGTGTTATTACTCCACCAGTAGGGGTTCCAGCTGCAAAGTCGTCCATTAAAAGTAACTATAAAATGGATATTGGTGTCAGGATCCGTGTTCGAAATGAGACGAACGATAATCATACCCTCTTGTTTGTGGTTTCAAATAGTTTGGGATCGGAATTCGCATGGCTTGATATCAAAGATGGTACTGTTCGCTTCATTTACCGCATTGGTGACCGTATGAAGATAGTTCGCATCCCAAATCTCAACCTCACGTCAGGAATCCATGATATCTACGTAAAGAGACGCGGTAACGTGGCATCCATGCAAATTGGTCACATTGGTAAAAGCATCACGTCAACTGGTGGATCAAGTCAGTTGCTAAATCTTGGAGGAGGCAGCGTTTTTACTGGTGGAATCCCACGTGTAACGGCTCTCCTTGTCGTCAGGGCCATCATCGAAAGCGGCGGCAACGCCATTGTACGTTTCGAAAACGGTCGAGTCATAACTTCGTGCTCGTCATGGATGATGAATTCTGGTGCCACATTAATTACCGTACAAAGAAATGGATCCGTGCTCATCACTAGAGACTACAAAGGCAGCTTTCGCAAAGAATTTCGACAAAGTGTACGAGCTATACATTCCCGTACTACTAAGTACATTGTTACAGGATCAGTTGGACCAACTCTTAAACGAACCATTACCCATTACTCCTACAGCTCTAGCACTGGAGGAAGTTCTAGTTCTAGTTCCAGTGGAGGATCTAGTTCTGGTGGGGGTGGTGCTACCGGGAGTGGATCTGGCTCCGGAAGTGGTTCGGGCGGAAGTAGTGGTTCTGGAAGTGGTTCTGGTTCCGGCGGAAGTAGTGGTTCGGGAAGTGGTTCCGGTTCCGGTGGGAGCGGTGCTTCCGGCGGAGGTAGTGGTGCCGGAAGTGGTTCTGGTTCCGGCGGAAGTAGTGGTTCGGGAAGTGGTTCCGCTTCCGGTGGGAGCGGTGCTTCCGGCGGAGGTAGTGGTTCCGGAAGTGGTTCTGGTTCCGGTGGTAGTGGCAGTTCGGGTGGAAGTTCGAGCTCTGCTTCATCCAGCGTAAATTCAAGTCATCACTTTGCCTTTATCAAAGGAGGATATGGTGATGAACTTCACAATTCACTTGCAACTCTAAGAAACCAAACTCATCCAAATGATTCCTTGGCAGTTATAACAGATTATGGAGGATGTCTAAGGGAGGCACGCTATAATGGTTTAAACCTCGACAGTGAAGTCACTGTCAAGAAGTTCAGACAAAACTTAATCATAGGCTGTGAATGTAAAGCTGGCGGTTGTAACAAGGGCGTGTGTTTAGTCAACGTGACAGTTCCAACATGTCAATGCAGGACAGGATGGTCTGGACCGACCTGTACCCAGATAAACAACAAGAGGAAACCACCACCAGATCAGCGAGCAGTTGATGACGAAGAAACACCTAAAGGATCCTGGAATTGGTCAGCTCTGCTGCTGTTCTTCTTCATTATCTTGATATTACTTCTTCTTTTGGCGTTGTATCTGTGCTGCAGAACGAGACCTGTGAAGGAAGAGCCTGAACCCGTACCTGGTTATGGAACAGTTCGGGAGTACAACGATGTCGATGGCCGTGATGTGGACAATAACGCGTTTAACATGAAGCATTTGATGAAATACGTGTACACAACACACGAACGTGAAGCTCTTCATAAACACGGTATAGGTGTGAGGACATACCCCGATGAGGAGATCAAAGGCAAAGATAATGAACTGTATGATATCAACCACCTAATGAAGTACAGCGTTGTCCACTCACTACCCAACAAGGAGGACCCATCCGGTATAGATCCAATTTCGGGCGTTGGCGCAGCGCCTGCGAAACCTGCCCCCGATCCTAACAGTAAAGCAAAACCAAAACCAAAAGTTGACGAGAATTTGCTAGGCACTGACAACGACGGTTACGATGGAGGAGCTGGTCATCCATCTGAAAAACCTGCAACACACGATTCTAAAGACCCTCGTGTCAAACAATCTTTAGCAGGTACTCACAATGAAGGCTACGATGGGGAACGTGGTGCTTCTAGAGGACCTGATTCTAACCTTTCTGCCTTGTGGCATACCTCAGATAAACATAGCCAAGTCACAGAACCCCATGCTGGTTCTGATAATGCTGGTTTTGATGCAGTGGGAGGTGGTGGTGGTGGACAATCTAGAAAAACTAGCACATACACTTATGGACATTCTAATTGGCATACCCAAGATAATTCAGTATGGCGCACGCCAGACAAACTGGACCATGACAAAGACTCTTCCGTTTGGCTTTCTTCAGATCATGACCACTCCACTCCGTCACATGGTCACAACCATGACCACTCCACTCCGTCACATGGTCACAACCATGACCACCCTTCACACACCCATCTCGTACACGTGCGCAAAGGCTTCGATGGATCACGTGACGAAGTCAAGGTGTTCTCGCATGAAGGTCATGACTTTGATCTCGATGATCACCTTAGTTGCCCTGGTGATGGTGATGACGTCGCAGATCACAAAGACATCGAGGATTTCCACATTCCAGAACACTTACAAGATAAATTCCGAAATTTAAATATTGTGTATCACCCAAAAAGTCAATAA

Transcript

gene11391.t1

Protein

gene11391.t1

MAMLDSVLIFPLIMASRWKLVVIFMAVLCYVPSEQTIIKATVPEDKPSGYVVYRFEAPPSGEIFQVYDSRYTDSLEQLKLFDVSESGVLSTNQPLTYHHDGKNTFEITVVRRKRGETSGGIAYTLQVKITDTNNYLPTFGFRIYNGTIWENSPPNTKVKGIVNCHAEDKDSFGFKGFAITDGNEKGYFKLETLQVGANEKFLEVRTTNIPVVKTSSKNEEITLVVEAEDNGVPNKKAITKIVITVLGINKHVPKFEKKHYKANVSEEMQIMSTAVKVHAADNDVGRDGSIYYTLKPQSSYFTVNPVNGHIELIRSLDYNVKKLFDLTVFATDRGVPSKESSAKVTISIQKDVPLYPPQAAQHPGKNTAPSFMAAVLAVNVREDLPLGSFVTLVRATDNDPPGPNRQLVYSLTGNNADWFKLDTDTGLLTLQKKLDYESGPKLFNFTVKVTDKGSPPLSTSTSLAIYVMDVNENYNPPIFEPAVRFLKLPEDTPIGKSVLTVSATDKDPGPDGKLVYSAISGEGINYLNVDEKTGVVTTIEYLDREMNPHFEILIAAHDTGNFPIRSRLYLVIEVEAVDDLFPQFLTTVTRATVPDGSPENTFVTVLHAVDLDSQGLVYTIKNAGVNDPFKIQTDTGVIRTRRALDRKAGDKEHYQLTIQVQNGPRKAQALVDITITQSGNVAPRFTTSSYSLAVKENMGKIDSLICLAATDNSDGVIKYTITTGGTTTFAVGETSGKFSILRSFDYEVESAYDVDVQASNTNKKTAVASIKIRITDDDDRPSFKQTKYELTVSEDTAPGTTLLTTIKSGFEFQDVDSSPDQYECSMKEVTSSYVIDHFRLVRVKRECFLVTKKAFSYSKETQFRFNVTATNKDFQNMYTSCSVVVTIKDANNNGPVFEQDDYWVTVSSDTYVDTSILQVQAPDLDRDANGRVSYQILSSGASSKVNGYYRFFIDPDNGVVTTTKSLLRNQLYAFIVKATDKGSPVKESQTSVRVSVYSPTSTPVKFQEPRYTKSILESEIIGTKVTKVQATGPAAISYSIVGGNTGSRFRVDSGSGQIALNRELDYETKNSYKIAVRATCATTPKMAADVIVEVTVTDVNDNPPKFVLYQDPEVVVINSFTPKDTKIFKAIAEDPDSSKFGPIIYSIDASKSQPTSNLPFSIDKSNGDVKTSKLVKYSDSSKYSVAIVATDAGSKTGSMILTVNVMDVKAPPTFPSKKYTFTPKEDMPIGYEVGSILATYGDSTQLLKYSITSGNKDNTFCINSQGTISTTKQLNKETAESYKLNAEVALGEHSDTTIVQIDVVDVNDNSPVFGKTVYTVDVPEDVAVGKEMVQVVATDKDSGSSGEISYSITQPVEDSSSKLFTMNAKTGVITLKASLDHEYIQQHVLYVTAEDNGSPKLAAMTKVVVNVKDVNDNAPRFSTQLFIATESINAQPGDHVIQVYASDADRGKNSQLIFSIISGNNEGLFAINEENGLVTVQKPLATAQQLKLNLTIGVKDHGNPPRTGTSSLLITIELRDVPPKFTVKPLVVYVKEGIPPGYRVATVRASTSALLSFSIVSGNDGNYFTLDSLSGVIMATKMLDFETRKQYRLGITAVDSKGDGDKVTLVINLIDINDSPPIFPGVVNNVLVKEVEGTSIFANDIVTNVAAFDQDMNDKITYEISSEGQKYFTIDSDGNLIGIKTMKSISEPIKFEITARDSANPPHVTKAKVTVEFLNQIPGQQPLRVSIREDTKIGTKIATILKFFPIGLFKIINPPDAPFVVEISGVVKLSGKIDFEKKVSYVLTIRQLESSTPGARYVDQLLEVFIRDVNDNNPKFTVSVRYGHVNANSRAGANVLHVSSSDADSTSNGVVGYQLDPKNQPFAFNPITNEIEASGTLDKSQYEVKLSPFDHGRPKRKDPPLTFNIDVAQVPPSFIGLTGNHYRFTVSENELPGKKIGTVNAVSSSGVHVAYFIESGNVRNSFMMNKMSGGIHLNYILKYEKHDRLYNLTILAIELIPRGLKSRIKVKIELLNYNDYYPVFTKMVYHKSVQENFPIGSSILKVSATDCDCSKDCTCEVGQLKYSLKNTDLFSIDANTGVLSPAKTLDYEEVTWSVFKVSVNDVGDHTKNSSSFVNITLTGVNDNAPHFPHSEQVFGIHETAVVGKTLAYVTANDKDKDELTYTIEGDSGPFTIDKNEGLISLVKPFPVVIPDWKYTFDVAASDGLSKTVVRVIMKIIDQNNNKPLFTVCNATTLQENMFPGRKVTQVKATDKDTGKNGEVEYFLAYGQNDFNIDNTTGIITTKYSLDREKRKRHVIVVRAEDAGHDADADERLSSYCVIRLKVLDVNDNYPEFLIHRYHASVYQQSPVGTAIMKVSAHDSDLGDNGHVNYALKEKSDLFAVDKESGLMTTTADLSALSGSYEINVIASNTMPMAVSGIVDSSLNKASVFVSITTEKPPEFTKHLYNANVPEDCEVGTTVLQIQAKSMNNRKIIYESLNEHPGAKQQFSVQPTTGIIVTSTKLDHETERNYELQFRATETTGSYVLFSTCFVNISIVDVNDNTPTFTMERYEARVMENSPKGTPVIKIDAEDVDLGSAGRVTYKFAPKWDYQLFTINSRNGLVRTNAEFDRERKSRYYVEVTASDQGTPPHSTHTYLGVSIIDRNDQDPQFLNKQMTVSVSEDTVVGSAIFQLSAVDYDVGKNALMYYFISGGNRDHIFSLKTVITPKNYAEVILDKKLDYEFRREFKLRISGADGKTSDFGYLTVKVTDANDNAPLFNQIAYYAIINEETKEGVPVLTVRATDIDGPQTQSPLSYSLGDTGKRHFRIDSSTGVIYTSARIDREAMPFVFFMVFVSDGKHTGSAGVKVTFKDINDNAPVFPNPPYYGFVSENSAPGTAVMIIQAVDYDDPDAGGNTHIEYSLVDSSKNNFAIDKSTGQITTRAVFDREGIFSNYSIEVRASDKGNPSLSSTVRFTAYIYDVNDNKPRFTDTFFYGKVSEDAPQGTIITQVTALDEDQGMNSEFEFRITAGNDPYGFYINPFTGDVVVSGLLDFDKKRSYNMTVTVYDRGMPPLLADEPAYIIIGIQDANTHPPFFKNKNYNVELREDVAIGYQVVVLSSLDKDQKSTTKKLNYEITSGNEKGLFAIQANKVDFFQGEIYTIARLDREDISTFTLLISVTDEVEQNGTCTVVITVVDVNDNGPVFQPSYYMASIKENFNAEQFVATIKAVDSDLPSNGPPFTFHLVNTTLTNRFRFKTSTATSSSVQLFAYGLFDREETASFQLYVKATDSGTPAMSSYAYVFVNVLDQNEHEPFNGDITIIVNGLDGLFIGGAIGKPYYKDEDFTGDINTYAITNQSPGQYFTISTDSGNITAAKDLPLGTYSVVASITEKNARIGNSTNYPKTVTSNVKVIVRNVTRSAVDASVTLRLSMLQVEYFVGDYYSKVELLLASLFAAQRSNVFIFSIQHVMASLPTVDLQIAIMDNTEMFISTFVIMSTITKQQSTFQDVEIHLTTPPPPPHSEIHLTTPPPPPPHSEIHLTPPPPPSPPHSEIHLTTPPSPSHSEIHLTTPPPPPPHSEIHLTPPPPPSPPHSEIHLTTPPPPPPHSEIHLTPPPPPSPPHSEIHLTPPPPPSPPHSEIHLTTPPPPPPHSEIHLTTPPSPSHSEIHLTTPPPPHSEIHLTPPPPPPPPHSEIHLTTPPPPHSEIHLTTPPPPPPPHSEIHLTTPPPPPPHSEIPLALRIFVSNEGPRLNKCLLCVTTGLSLSAVGIDMCKGTNKQIGACVTQTVPFTSYRVAPGDYGKVPAPASSLTIVSIDVSLRALYLPLIPVTPTCATNNPCLNGGTCHDVMPSGVVCQCNPGLLGPFCQETTRSFKGDSYIHLTHLKTVAWSVIEFQFITKEANGLMLYQGPTTEVVTGGTEDFLAIQLVQGYVQVVMSLGVGPLYLNMTRGKKLNDGEWHDVKLERQLLKVMLTINNCDQMPIVVKPDGSMEEDKQNCQIEGVIPGDDLYLNGNWPLQLGGVINPSLKYPPLSYTGFVGCIRNVLDSGMMYDLSNPLVEVNSAIGCDLANRCPNCNNNGYCEPQMNKPSYCVCNLGKTGAICKETSEGYYYLANSFTMYTSTAWSSTPSSWLLSRSSSSTMWTPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTPIKTRKLRSVITPPVGVPAAKSSIKSNYKMDIGVRIRVRNETNDNHTLLFVVSNSLGSEFAWLDIKDGTVRFIYRIGDRMKIVRIPNLNLTSGIHDIYVKRRGNVASMQIGHIGKSITSTGGSSQLLNLGGGSVFTGGIPRVTALLVVRAIIESGGNAIVRFENGRVITSCSSWMMNSGATLITVQRNGSVLITRDYKGSFRKEFRQSVRAIHSRTTKYIVTGSVGPTLKRTITHYSYSSSTGGSSSSSSSGGSSSGGGGATGSGSGSGSGSGGSSGSGSGSGSGGSSGSGSGSGSGGSGASGGGSGAGSGSGSGGSSGSGSGSASGGSGASGGGSGSGSGSGSGGSGSSGGSSSSASSSVNSSHHFAFIKGGYGDELHNSLATLRNQTHPNDSLAVITDYGGCLREARYNGLNLDSEVTVKKFRQNLIIGCECKAGGCNKGVCLVNVTVPTCQCRTGWSGPTCTQINNKRKPPPDQRAVDDEETPKGSWNWSALLLFFFIILILLLLLALYLCCRTRPVKEEPEPVPGYGTVREYNDVDGRDVDNNAFNMKHLMKYVYTTHEREALHKHGIGVRTYPDEEIKGKDNELYDINHLMKYSVVHSLPNKEDPSGIDPISGVGAAPAKPAPDPNSKAKPKPKVDENLLGTDNDGYDGGAGHPSEKPATHDSKDPRVKQSLAGTHNEGYDGERGASRGPDSNLSALWHTSDKHSQVTEPHAGSDNAGFDAVGGGGGGQSRKTSTYTYGHSNWHTQDNSVWRTPDKLDHDKDSSVWLSSDHDHSTPSHGHNHDHSTPSHGHNHDHPSHTHLVHVRKGFDGSRDEVKVFSHEGHDFDLDDHLSCPGDGDDVADHKDIEDFHIPEHLQDKFRNLNIVYHPKSQ

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8V7Q1	Protocadherin-like protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q8R508	Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE=1 SV=1
Q8BNA6	Protocadherin Fat 3 OS=Mus musculus OX=10090 GN=Fat3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000983 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028 all species →	Cadherin	Cadherin domain	Domain	Interproscan
PF02210 all species →	Laminin_G_2	Laminin G domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126 all species →	Domain	Cadherin-like	Interproscan
IPR020894 all species →	Conserved_site	Cadherin conserved site	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR039808 all species →	Family	Cadherin	Interproscan
IPR001791 all species →	Domain	Laminin G domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24027 all species →	CADHERIN-23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0016342 all species →	Cellular Component	catenin complex	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0098742 all species →	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16669	FAT4; protocadherin Fat 4	-	Cell adhesion molecules	ko04515	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.