Gene detail

Detailed information of gene11396.t2 in Actinoscyphia liui

Genomic Location: chr3:34191335...34205329
NR annotation: XP_020906856.1, dnaJ homolog subfamily C member 10 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene11396.t2

ATGCCAAGACTGTGCCAACACCGTGCCAACACTGTGCCAAGACTGTGCCAAGACTGTGCCAAGACCGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAACACCATGCCAAGACCATGCCAAGACCATGCCAAGACTGTGCCAAGACTGTGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAAGACTGTGCCAAGACCGTGCCAAGACTGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACTGTGGCAAGACCATGCCAAGACCATGCCAAGACTGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAACACCATGCCAACACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACTGTGGCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAACACCATGCCAACACCATGCCAAGACCGTGCCAAGACCGTGCCAAGACCGTGCCAAGACCGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAACACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAAGACCGTGCCAAGACCATGCCAAGACCATGCCAAGACCGTGCCAAGACCGTGCCAAGACCGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACTGTGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACCATGCCAAGACTGTGCCAAGACTGTTTATACGATGATGATTCTGAAATTATAACTCTTAGCTACTCAGATTTCCAATTATCTGTGGAAGGCAGTGATGATATCTGGTTTATCAATTACTATTCACCTTTCTGTTCTCATTGCCATGACTTAGCTCCAACGTGGAGAGAAGTTGCAAAAGGCCTAGAAGGTGTCATTAGATTTGGAGCTGTAAATTGTCAAGAAGATTGGGCACTATGTCAACAACAGAGAATTCAGAGCTACCCATCTCTTGTACTTTACCCTTCTCAACACCTATATAGAGGACAAAGGACAGAAAGAGCACTAGTTAGATTTGTTCTGGATGCACTTGATTCCAAAGTAGTAGAATTAACAAAAGATAATTTCAAGGCAGAAACATCATTGCCAGATCATCCTTGGCTGATTGACTTCTGTGATCCATCAGGAGACTGTCTGTTAGGCGATACCAAACTAAAACTTGCATCCGTAATGGATAATTTAGTCCAGGTTGGATCAATTGATTGTTCACATGATGAGACCTTGTGTACCTCTCTTGGTTACCATGGTGAAGTTGTTTACTTTCCTGCAAATAGTTTAGAAGCTCGAAAGGGCACTGTTATAAAAAGTTTAGAAACTCATGATATTGTACAGCAAGTCTTACAATTATTGCCTGGGCCACAGAGTATAGATATCAAGAGTTTTCAAGAACTACTTAAAGAACTAGAAGCTGATGATCAGCAGCCTTGGCTTGTTCACTTTGACAAAGGAGCTGCCGCTGGAATAGAAATCAAAAAGTTACCAGGTGTTATAAGTGATATGAAGGTTGGTCATGTCGACTGTTCCAATGCAAATGACCTCTGTCAATCACTTCATGTCACAAAATATCCTCGTATTGCCTTGTTTAAAAAAGTTGGCTTTGAATGGCATCATGGTCGTTTTACGGCACATGACATTGCTGTGTTTGCTAAGGAAAGTGCATCATCCAATGTACAAACCCTTGGTCCAGATGACTTCCCTGGTGTCATCGCACCGAATCGTCCTTTCTTTGTGGACTTCTTTGCTCCTTGGTGTCCTCCCTGCATGAAGCTTTTACCAGAATACCGCAAAGCATCGCGGTCCTTCATTGGAAAACGCAACATTGGATTTGGGACTGTGGACTGTACAGTTCACGTCAATCTGTGCCGTATGTATAATATTCACTCCTACCCAACTACTATTTTGTACAACAACACAATACCAATCCAGTTTAGTGGACACCATTCTGCTGGTGATTTAATAGACTTTGTTGAGAACACTCTCAGTCCATCCGTTGTGGATTTAACCCCAGAAACCTTTGAATCGCTCGTCAGTCATAGAGACTTTGGCGATACTTGGCTGGTTGACTTCTACGCACCTTGGTGCGGCCCATGTCAGGAACTCTTGCCCAACTGGAACAAATTAGCAAAGCGTTTAAAAGGAGATGCACACGTGGCTTCAGTAGATTGTGTCAAACACCGAAATTTCTGTTTGCAACAAAACGTACGTTCCTATCCAACCATTCGACTATATTCCCATGGAAGCACTGGATCGTGGGATTATGTTGTCCATGACCAAGGCTGGAGAGACGTCGAGTCATTGTACATATGGTCCTATCAACACCTTCCATCGATAGTAACAGACGTTACAGGAGATCTCTTTTATAGTGAAATACTCAATAGTGAAGAGCCGTGGCTGCTGGATTTTTACGCTCCATGGTGTGGTCCTTGTATGCGATTTGCTCCTCATTTTGAAAGAGTTGCCAAGATGTTTGGCGAGAAAGTGCGATGTGGAAAGGTGAACTGTGAGCAAGATTATCAACTTTGTCACCAAGCTGCCATTCAATCTTACCCTTCAGTAAGACTCTACCTAGGCGCACAGAGTGGAATGTCTCAGTCCTTGGAGGGAGATACATACGTTGAAACACAAGTACCTGAAGAAATCTTTGAGTTGGTCAAACAAGGACTCGAAGAGAGAGAAGACAAAGAAATGGGCGACGATAAGGATGACAAAGAACCGAAGGATTTGCGAGAAGAGAAAGATGAAAGAGAAATTAAAGAGGAAAGAGAGGAAAGAGATGAAAGAGAAATTAAAGAAGAGAGAGAGGAAAGAGATGAAAGAGAAATTAAAGAAGAGAGAGATGAAGCGGATGAAAGAGAAATTAAAGAGGAGAGAGAAGAGAGGGATGAAACGGATGAAAGAGAAGGACACGACAATTTTGAAAGAGAAAGAGAAGCAGCTGAAGAAAAGGATGAAAGGGAAGAAGAGACGGAAGAAAGAGAAGTGCCGGAGGAAGCTCTAAAGGATGACGAACGAGAAGAGGTTGCAGAGGAAACTCACAAAGATGACGATGTCATGCATGAACCTAGGCATCCTATCCACGATGAGTTTTAA

Transcript

gene11396.t2

Protein

Uniprot

Uniprot term	Description
Q8IXB1	DnaJ homolog subfamily C member 10 OS=Homo sapiens OX=9606 GN=DNAJC10 PE=1 SV=2
Q5R5L3	DnaJ homolog subfamily C member 10 OS=Pongo abelii OX=9601 GN=DNAJC10 PE=2 SV=1
Q9DC23	DnaJ homolog subfamily C member 10 OS=Mus musculus OX=10090 GN=Dnajc10 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00085	Thioredoxin	Thioredoxin	Domain	Interproscan
PF21410	MAP6	Microtubule-associated protein 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013766	Domain	Thioredoxin domain	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR017937	Conserved_site	Thioredoxin, conserved site	Interproscan
IPR007882	Family	Microtubule-associated protein 6	Interproscan
IPR052460	Family	Endoplasmic reticulum disulfide reductase	Interproscan
IPR035674	Domain	ERdj5, C-terminal thioredoxin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44340	DNAJ HOMOLOG SUBFAMILY C MEMBER 10	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000226	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0005788	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0015035	Molecular Function	protein-disulfide reductase activity	Interproscan
GO:0016671	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	Interproscan
GO:0036498	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051787	Molecular Function	misfolded protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09530	DNAJC10; DnaJ homolog subfamily C member 10	EC:1.8.4.-	Membrane trafficking	ko04131	deepkoala