Gene detail

Detailed information of gene11480.t1 in Actinoscyphia liui

Genomic Location: chr3:35494142...35508632
NR annotation: CAH3149720.1, unnamed protein product [Porites lobata]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene11480.t1

ATGAAGAAAAAAATTATCTTTGGAGTGGTGATTGCCATTTGTCTTCTCATTTTGCTGCTCGCCGTCCTTCTCGTCTTATTTCTGTACGTGTTAAAAGAGAAAGATGCTAGCAAAACGTTTGACAGTAATGGTCCTTACAAACACGCTGTAGTTGCAGCAGATGCTGAGAAATGCTCAGAAATAGGACGAGACATATTCAAGAAAAATGGTTCAGCTGTGGATGCTGCGGTAGCCACCATGTTCTGTATTGGGATAATGAATATGCACTCATCAGGGATAGGTGGGGGTGGTTTTATGGTGGTTTATCAAAAAGCAAAGAGGTCTGCTCAAGTGATTGATTTTCGTGAACAGGCACCGGCTGCAGCAAGCGCCACCATGTACGTCAACACTGGTCTGAGTAGTCTTTTGAGTCCATCTGCTTCGGGGGTTCCAGGTGAGGTAAAAGGCTATCACCAAGCATGGCAGACATACGGTCGACTGCAATGGCGTGATGTGGTTCAACCTTCCATCAATCTGGCTAAAAGTGGTGTGCCATTAGGCAAAGCTACTTACAAAGCCATGACGGCGAAAAAAATATATATTCTTAAAGATCCTGGACTAAAAGAGATTTTCGTGAAAAAGAACGGAGAATTCATTAAGGAAGGAGACAAAATGAACCTCACCAAGCTGGCAGAGACGCTGGAAACTATACGAGATAACCCTGATGAATTCTATAATGGTAAACTAGCCCAGCAGATTGTTCAAGACGTACGAGAAAATGGCGGGATAATCACCTTTCAAGATATGAAGGATTACAAAGTAAAAGTCCGCAAAGCCGTCATAAGTACATTGGGTACCGATAAATGGTTCACCGCACCTCCCCCTGCAAGTGGTGTAGTGTTGGCTTTGATTCTTAATATTCTCAAAGGCTACAATATGACCCCAGCAGACAGGGCTGATACAAAGAATTCCACACTGACCTACCATCGCATTGTAGAAGCCTTCAAGTTTGCTTATGCCTACCGAGCATTTTTGGGTGACCAGGATTTTGCAAATTTGACCGACACTGTGAAAAAAATGACCGATCCTCAATATGCTGAAGGACTTCGTCTAAAAATCAACGACAGCAGGACGTTTACAAATGTTAGCTATTATGGAGGTTATTACGACCAGGACGGTGGCAGCACGACACACATGTCGTTGATAGCACCAAACGGTGACGCTGTGTCGGTTACATCAACAATTAACTACTATTTTGGGTGCAAATATCGAAGTCCGACAACAGGGATCATCATGAACAACCAGATGGACGATTTTACAACCCAACCAGGAAAGCGCAATGAATTTGGATTCGAACCATCTCCTGCGAACTTCATAGTTCCTGGGAAACGACCTCTTTCATCGTCCGTTCCGTCAGTTTTCGTTGATAAGCATGGTGCTGTTCGCATAGTTGCTGGTGCTGCAGGAGGAATGACGATAACAACAGCAACAGCTTTAACTCTAATGAATTACCTGTGGTTTGGGCGTACACTGTCTCAGTCAGTAGACGATCCCAGGATCCACCATCAACTCATACCAATGAACGTTAAAGTGGAGAAAGACTACCCCATGGCCCAGGAAGTTCTTGATGGCTTGAAAAACCTTGGTCATGAAATCAAAACCAGTGACTTTATCGCCGTCGTTCAGGCTGTTGCCAGGGGAGACGATGGGTTGTTGTGGGGCAAGTCAGATCCAAGAAAAGTGTCTCACGTTGACGGCCCTTACAAACACGCTGTAATTGCAGCAGATGCTGGAAAATGCTCAGAAATAGGACGAGACATATTCAAGAAAAATGGTTCAGCTGTGGATGCTGCGGTAGCCACCATGTTCTGTCTTGGGATATTAAGCATGCACTCATCAGGGATAGGTGGAGGTGGTTTTATGGTGGTTTATCAAAAAGCAAAGAGGTCTGCTCAAGTGATTGATTTTCGTGAACAGGCACCGGCTGCAGCAAACGCCACCATGTACGTCAACACTGGTCTGAGTAGTCTTTTGAGTCCGTCTGCTTCGGGGGTTCCAGGTGAGGTAAAAGGCTATCACGAAGCATGGAAGACATACGGTCGACTGCAATGGCGTGACGTAGTTCAACCATCCATCGATCTGGCTAAAAGTGGTGTGCCATTAGGCAAAGCTACTCACAAAGCCATGACGTTAATGAAAACAAAGGTTCTTGAAGATCCTGGACTAAGAGAGATTTTCTTAAAAGAAAATGACAAGGAACTTGAAGTAGGAGACACGATGAACCTTACCAAGCTGGCAAAGACGCTGGAAACTATACGAGATAACCCTGATGATTTCTACAATGGAAAACTAGCCCAGCAAATTGCTCAAGATGTACAGAAAAATGGCGGGATAATCACCTTTCAAGATATGAAGGATTACAAAGTAAAAGTCCGCAAACCCGTCATAAATAAATTGGGTACCGATAAATGGTTCTCCGCACCTCCCCCTGCAAGTGGTATATTGTTGGCTTTGATTCTTAATATTCTGAAAGGCTACAACATGACCCCAGCAGACAGGGCTGATACAAAGAAATCTACACTGACCTACCATCGCACTTTAGAAGCCTTCAAGTTTACTTTCGCTCAGCGACCTTATTTGGGAGACCCGGATTTCGTTGACTTGAACGACACTTTGAAAAAAATGACCGATCCTCAATTTGCCGAAGAACTTCGTCTAACCATCAACGACCACAAGACGTTTACAAATGCTGGTCATTACGGTGGCCATTTATACACAGATGACAGTGGCGGTACGACTCACATGTCGTTGATAGCACCAAATGGCGATGCTGTGGCGGTTACTACCTCTGTTAACTATTATTTTGGGTGCAAATATCGAAGTCCGACAACAGGGATCATCATGAACAACCAGATGGACGATTTTACAACCCAACCAGGAAAGCGCAATGAATTTGGATTCGAACCATCTCCCGCGAACTTCATAGTTCCTGGCAAACGACCACTCTCTACAGTCACTCCGTTAGTTTTAGTTGATAAGCATGGCGCTGTTCGCATAGTTGCTGGTGCTGCAGGAGGAATGGCCATACCAACAACAACAGCTTTAACTCTAATGAATTACCTGTGGTTTGGGCGTACACTGTGTCAGTCAGTAGACGATCCCAGAATCCACCATCAACTCACACCAATGAACGTCTACACGGAAGAATCCTGGCCAATGCCAAAGGACATTCTTGATGGCCTTGAAAGATTCGGCCACGAAATTCAAACCTTTTTGGATACGTCCTTTATAGGTGTTGTCCAGGCTGTTGCCATGGGAGACGATGGGTTCCTGTGGGGCAAGTCAGATTCACGGAAAGATGGCCACCCAGCAGGCTTTTGA

Transcript

gene11480.t1

TTTATGCTGAATCGTCGGAATGAAGAAAAAAATTATCTTTGGAGTGGTGATTGCCATTTGTCTTCTCATTTTGCTGCTCGCCGTCCTTCTCGTCTTATTTCTGTACGTGTTAAAAGAGAAAGATGCTAGCAAAACGTTTGACAGTAATGGTCCTTACAAACACGCTGTAGTTGCAGCAGATGCTGAGAAATGCTCAGAAATAGGACGAGACATATTCAAGAAAAATGGTTCAGCTGTGGATGCTGCGGTAGCCACCATGTTCTGTATTGGGATAATGAATATGCACTCATCAGGGATAGGTGGGGGTGGTTTTATGGTGGTTTATCAAAAAGCAAAGAGGTCTGCTCAAGTGATTGATTTTCGTGAACAGGCACCGGCTGCAGCAAGCGCCACCATGTACGTCAACACTGGTCTGAGTAGTCTTTTGAGTCCATCTGCTTCGGGGGTTCCAGGTGAGGTAAAAGGCTATCACCAAGCATGGCAGACATACGGTCGACTGCAATGGCGTGATGTGGTTCAACCTTCCATCAATCTGGCTAAAAGTGGTGTGCCATTAGGCAAAGCTACTTACAAAGCCATGACGGCGAAAAAAATATATATTCTTAAAGATCCTGGACTAAAAGAGATTTTCGTGAAAAAGAACGGAGAATTCATTAAGGAAGGAGACAAAATGAACCTCACCAAGCTGGCAGAGACGCTGGAAACTATACGAGATAACCCTGATGAATTCTATAATGGTAAACTAGCCCAGCAGATTGTTCAAGACGTACGAGAAAATGGCGGGATAATCACCTTTCAAGATATGAAGGATTACAAAGTAAAAGTCCGCAAAGCCGTCATAAGTACATTGGGTACCGATAAATGGTTCACCGCACCTCCCCCTGCAAGTGGTGTAGTGTTGGCTTTGATTCTTAATATTCTCAAAGGCTACAATATGACCCCAGCAGACAGGGCTGATACAAAGAATTCCACACTGACCTACCATCGCATTGTAGAAGCCTTCAAGTTTGCTTATGCCTACCGAGCATTTTTGGGTGACCAGGATTTTGCAAATTTGACCGACACTGTGAAAAAAATGACCGATCCTCAATATGCTGAAGGACTTCGTCTAAAAATCAACGACAGCAGGACGTTTACAAATGTTAGCTATTATGGAGGTTATTACGACCAGGACGGTGGCAGCACGACACACATGTCGTTGATAGCACCAAACGGTGACGCTGTGTCGGTTACATCAACAATTAACTACTATTTTGGGTGCAAATATCGAAGTCCGACAACAGGGATCATCATGAACAACCAGATGGACGATTTTACAACCCAACCAGGAAAGCGCAATGAATTTGGATTCGAACCATCTCCTGCGAACTTCATAGTTCCTGGGAAACGACCTCTTTCATCGTCCGTTCCGTCAGTTTTCGTTGATAAGCATGGTGCTGTTCGCATAGTTGCTGGTGCTGCAGGAGGAATGACGATAACAACAGCAACAGCTTTAACTCTAATGAATTACCTGTGGTTTGGGCGTACACTGTCTCAGTCAGTAGACGATCCCAGGATCCACCATCAACTCATACCAATGAACGTTAAAGTGGAGAAAGACTACCCCATGGCCCAGGAAGTTCTTGATGGCTTGAAAAACCTTGGTCATGAAATCAAAACCAGTGACTTTATCGCCGTCGTTCAGGCTGTTGCCAGGGGAGACGATGGGTTGTTGTGGGGCAAGTCAGATCCAAGAAAAGTGTCTCACGTTGACGGCCCTTACAAACACGCTGTAATTGCAGCAGATGCTGGAAAATGCTCAGAAATAGGACGAGACATATTCAAGAAAAATGGTTCAGCTGTGGATGCTGCGGTAGCCACCATGTTCTGTCTTGGGATATTAAGCATGCACTCATCAGGGATAGGTGGAGGTGGTTTTATGGTGGTTTATCAAAAAGCAAAGAGGTCTGCTCAAGTGATTGATTTTCGTGAACAGGCACCGGCTGCAGCAAACGCCACCATGTACGTCAACACTGGTCTGAGTAGTCTTTTGAGTCCGTCTGCTTCGGGGGTTCCAGGTGAGGTAAAAGGCTATCACGAAGCATGGAAGACATACGGTCGACTGCAATGGCGTGACGTAGTTCAACCATCCATCGATCTGGCTAAAAGTGGTGTGCCATTAGGCAAAGCTACTCACAAAGCCATGACGTTAATGAAAACAAAGGTTCTTGAAGATCCTGGACTAAGAGAGATTTTCTTAAAAGAAAATGACAAGGAACTTGAAGTAGGAGACACGATGAACCTTACCAAGCTGGCAAAGACGCTGGAAACTATACGAGATAACCCTGATGATTTCTACAATGGAAAACTAGCCCAGCAAATTGCTCAAGATGTACAGAAAAATGGCGGGATAATCACCTTTCAAGATATGAAGGATTACAAAGTAAAAGTCCGCAAACCCGTCATAAATAAATTGGGTACCGATAAATGGTTCTCCGCACCTCCCCCTGCAAGTGGTATATTGTTGGCTTTGATTCTTAATATTCTGAAAGGCTACAACATGACCCCAGCAGACAGGGCTGATACAAAGAAATCTACACTGACCTACCATCGCACTTTAGAAGCCTTCAAGTTTACTTTCGCTCAGCGACCTTATTTGGGAGACCCGGATTTCGTTGACTTGAACGACACTTTGAAAAAAATGACCGATCCTCAATTTGCCGAAGAACTTCGTCTAACCATCAACGACCACAAGACGTTTACAAATGCTGGTCATTACGGTGGCCATTTATACACAGATGACAGTGGCGGTACGACTCACATGTCGTTGATAGCACCAAATGGCGATGCTGTGGCGGTTACTACCTCTGTTAACTATTATTTTGGGTGCAAATATCGAAGTCCGACAACAGGGATCATCATGAACAACCAGATGGACGATTTTACAACCCAACCAGGAAAGCGCAATGAATTTGGATTCGAACCATCTCCCGCGAACTTCATAGTTCCTGGCAAACGACCACTCTCTACAGTCACTCCGTTAGTTTTAGTTGATAAGCATGGCGCTGTTCGCATAGTTGCTGGTGCTGCAGGAGGAATGGCCATACCAACAACAACAGCTTTAACTCTAATGAATTACCTGTGGTTTGGGCGTACACTGTGTCAGTCAGTAGACGATCCCAGAATCCACCATCAACTCACACCAATGAACGTCTACACGGAAGAATCCTGGCCAATGCCAAAGGACATTCTTGATGGCCTTGAAAGATTCGGCCACGAAATTCAAACCTTTTTGGATACGTCCTTTATAGGTGTTGTCCAGGCTGTTGCCATGGGAGACGATGGGTTCCTGTGGGGCAAGTCAGATTCACGGAAAGATGGCCACCCAGCAGGCTTTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P07314	Glutathione hydrolase 1 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt1 PE=1 SV=4
P19440	Glutathione hydrolase 1 proenzyme OS=Homo sapiens OX=9606 GN=GGT1 PE=1 SV=2
P20735	Glutathione hydrolase 1 proenzyme OS=Sus scrofa OX=9823 GN=GGT1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000244 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01019 all species →	G_glu_transpept	Gamma-glutamyltranspeptidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR043138 all species →	Homologous_superfamily	Gamma-glutamyltranspeptidase, large subunit, C-terminal domain	Interproscan
IPR000101 all species →	Family	Gamma-glutamyltranspeptidase	Interproscan
IPR043137 all species →	Homologous_superfamily	Gamma-glutamyltranspeptidase, small subunit	Interproscan
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11686 all species →	GAMMA GLUTAMYL TRANSPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006751 all species →	Biological Process	glutathione catabolic process	Interproscan
GO:0036374 all species →	Molecular Function	glutathione hydrolase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18592	GGT1_5, CD224; gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase	EC:2.3.2.2 EC:3.4.19.13 EC:3.4.19.14	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.