Gene detail

Detailed information of gene11545.t1 in Actinoscyphia liui

Genomic Location: chr3:36530533...36537611
NR annotation: XP_020905968.1, intraflagellar transport protein 43 homolog A isoform X2 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B5XBI1	Intraflagellar transport protein 43 homolog A OS=Salmo salar OX=8030 GN=ift43a PE=2 SV=1
B5X7E4	Intraflagellar transport protein 43 homolog B OS=Salmo salar OX=8030 GN=ift43b PE=2 SV=1
Q28CW2	Intraflagellar transport protein 43 homolog OS=Xenopus tropicalis OX=8364 GN=ift43 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003689 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15305 all species →	IFT43	Intraflagellar transport protein 43	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029302 all species →	Family	Intraflagellar transport protein 43	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33724 all species →	INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0030991 all species →	Cellular Component	intraciliary transport particle A	Interproscan
GO:0035721 all species →	Biological Process	intraciliary retrograde transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19675	IFT43; intraflagellar transport protein 43	-	Cilium and associated proteins	ko03037	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.