Gene detail

Detailed information of gene12076.t1 in Actinoscyphia liui

Genomic Location: chr3:44513221...44517193
NR annotation: XP_028516604.1, cyclic GMP-AMP synthase, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene12076.t1

ATGCCCAGGAACGCCCCTGGTGGTGGTCTTTATTGGCTCGTCTTTATTTTGCCATCTGAGCATCGAGGGTTAACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGAACAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACAGAGAGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACAGAGAGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACTTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGGTTGACAAGTGTGGACTGTGGACGTGTGGACCAAGGCTTGACAAGTGTGAAAGAACCGAAGTTTGCATCTAGATTTATTCTAGAAGGCCAAATTAAACTCAGTGACGTAAATGACTACGATGGCGTAAATGACAACGGTAACGTCTACGATGGCGAAGTCTTACAAAGTCGAAGTGAAAGAGAAGACATAAAGTCTATACCTGCTTCCACAGGAAACCAAAAGGGTGCCAGCAGTAAATCTACAAAGATACACAAACAGAAGAGACCCGCACTTAGTGTAAATTCCAAGAAACATCGAAACGCCAAGAATGTCAACAAATCAGTTACTAGTTCTAAAACAGATTCTGCTAAAAAACAAACCTTTGGGATTTCCAAAGTCCAAAAGATTACTCGCCCTAAAAGTGGACCCATCCTTGGACCATCGACTTCTAGAGCTGCAAAACGTACAAAACCAGAACAACCAAATCCAAAGCACCACAAGCGTCCAAAGCGTGACTTGCTTTCAATGTTCAGAAAGTATTCTGCAGCCAAGGTGAAAATTCCTAAAGATCGCACTCGATGGGCAAAGAAAATGGCCGACACACACTTGGAGCGCATCCGCGATCATTGTAAGAATTCGAAGAACGTTTTGGAGTATTTTAGTCATTTTGAATATACAGGAAGTTTCTATGAGCACCTTAAAGCTGAAGATGCTAATGAATTAGATATTCTAATTGCTCTTGATACGAAGGGAAAGGCGAATCTAGAGATTGAGGAGGTAGTCCCAGGCTATGCGCGAATCAGAGTAACCGCTGATTCTAGCAAGTACTGGAGGCGCAAGTTTATGGAGAAGGCAAATGGGTATGTGAGCCCTGAAAAAGTTCTTCGTTGGTTCTTTGGAGTTGTTCAACAAGCTATCAATGAATATAAAGAAAAAAAGAAAGAAGATGACCCAGTTCTTAAAGTCTCAGACCATGGTCCTGCCATTACATTGACAATCAATGATAAAGTCAACGAAAAGAAATTATCCGTCGATCTTGTACCCGCATTTCTTTTCAAAGAGAAAACATCCGATGGAGTCTCTCCTGCAGAAGGAAAGCACTATGTTGCAAAGATTTTACCAGAGGAATTGGCATTAAAGTACCGGCACTCTTTGCCGTGCAAACGAGAGATGCTCTGGAGAAGATCTTTCTCCCTCGATGAGAAGAGGAAGATGGCAAGTCTAGACAAAGACAACAGTGGTTGCAGACGAGAAGTTCTCAAGATTATTAAAACAATTGTACGCAATGATTCCACTCTCGCACAACTCTCTTCGTATCATCTTAAGACTACCTTTCTTCATTACAACTTCGCTGAAGAGAATAAAGAAATTGACTGGAGTGGGCAATGTCTTCAAGACAGGTGCTGTGATATCTTGTATGATTTGCGCGAGCATATAAGCAAAGGACTGCTAAGCCACTATTTTATTCCAGAGGTGAATCTTTTGGAAGAGCTGACTGCTGACAACCTTACAAACATCGAAGGTCGTTTGTCCAAGCTTCTTGATGAGAATGAGAACGCAATAAGAAATGTTCTCGATGTGAAACCTGGAGTTGATCGGTTTGCTGCAGTTAAAACGTCTAAGAAGCGCAAACGTAGAAGACAGAAACCGAGAAACCGAGAAGAAGAAATAGAAGAAGAATGTTATTAG

Transcript

gene12076.t1

Protein

Uniprot

Uniprot term	Description
A7SFB5	Cyclic GMP-AMP synthase OS=Nematostella vectensis OX=45351 GN=v1g211400 PE=1 SV=1
P0DXC0	Cyclic GMP-AMP synthase-like receptor 3 OS=Stylophora pistillata OX=50429 PE=1 SV=1
A4IG61	Mitochondrial dynamics protein MID51 OS=Danio rerio OX=7955 GN=mief1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20266	Mab-21_C	Mab-21 protein HhH/H2TH-like domain	Domain	Interproscan
PF03281	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024810	Family	MAB21L/Cyclic GMP-AMP synthase-like receptor	Interproscan
IPR046906	Domain	Mab-21-like, HhH/H2TH-like domain	Interproscan
IPR046903	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10656	CELL FATE DETERMINING PROTEIN MAB21-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23386	PWWP3, MUM1; PWWP domain-containing DNA repair factor 3	-	DNA repair and recombination proteins	ko03400	deepkoala