Genomic Location: chr3:46842045...46860198
NR annotation: XP_020907559.1, uncharacterized protein LOC110245615 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene12212.t1 |
| Transcript |
| gene12212.t1 |
| Protein |
| gene12212.t1 |
| UniProt accession | Description |
|---|---|
| P97471 | Mothers against decapentaplegic homolog 4 OS=Mus musculus OX=10090 GN=Smad4 PE=1 SV=2 |
| Q13485 | Mothers against decapentaplegic homolog 4 OS=Homo sapiens OX=9606 GN=SMAD4 PE=1 SV=1 |
| Q9GKQ9 | Mothers against decapentaplegic homolog 4 OS=Sus scrofa OX=9823 GN=SMAD4 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004893 (this species only) |
| Transcription factor family | MH1 · all TF in this species |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF03165 all species → | MH1 | MH1 domain | Domain | Interproscan |
| PF13771 all species → | zf-HC5HC2H | PHD-like zinc-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR034732 all species → | Domain | Extended PHD (ePHD) domain | Interproscan |
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR003619 all species → | Domain | MAD homology 1, Dwarfin-type | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR036578 all species → | Homologous_superfamily | SMAD MH1 domain superfamily | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013019 all species → | Domain | MAD homology, MH1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45888 all species → | HL01030P-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0005667 all species → | Cellular Component | transcription regulator complex | Interproscan |
| GO:0003713 all species → | Molecular Function | transcription coactivator activity | Interproscan |
| GO:0042393 all species → | Molecular Function | histone binding | Interproscan |
| GO:0042800 all species → | Molecular Function | histone H3K4 methyltransferase activity | Interproscan |
| GO:0044666 all species → | Cellular Component | MLL3/4 complex | Interproscan |
| GO:0045944 all species → | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
gene12212.t1.
