Gene detail

Detailed information of gene12222.t1 in Actinoscyphia liui

Genomic Location: chr3:47012408...47022212
NR annotation: XP_031569617.1, uncharacterized protein LOC116304100 isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene12222.t1

ATGTGGACTGCTCTAAGTATGTACGCTTTGAAGGAGACTTGGAAAGAGAAGAAAAAGCTGCGAAAGATGCAAAGGAAGCTCAAAGAACCGCGACAAATTGTCATCCCAGACGAGCTGTTCTACTCTGACGACGTAGGCTTCCTGACAACATTTGAAGAAGTCAGAGTGCAAGACGAACTACCATCGTTTTACGACCCTTCAGCGAGCGATGACGACTTCGCTAAATACGCACAGTTCGAATACTCTATGGGCGGCAACGTTAAAATGTACGACAATCACATCGCTTTATCAACTCCTAAAAAGAAACTCAATAAATCATTAGACCACGCGTTGAAGACTGAAGGTAACAAGCGTTCGAAGCTCGGTACTTCGACGGACACGATTAACGAAAGTATGGACACTTCTAGAGAAGACGCTCGACTCAAGAAGCACGGAGAAGACTTAGACTTTGGAACGTCGAATTTAACTTCCAATTTAGAAAACTTAGACCTATCAGATTTCCCCGGCAGACTCTCCAGGAATCCTCAACGAAGTGCGGACAGTAACAATGATATAGACATTAACAAAAAGAGTGACAGGGACTACTCACCGATTCGTAGCTCCACCCGAGGTCAGGAGCGACCGGAGGACTTAAGCACAACGGAGTCGAAACACAGCTTAGAGAGAGACTATTCACCCGTTCATAGCTTTGAGCAAATACTACAGGAAACTAAGCAGTATTACAAAGCCAAATCTACACTAACAGCTAAGAAAGATGACACTGCAGTTAACAGTCGTGCTGAGCAGGCGGGTCCAAGTGCGGTGACCAACCAATCGCTAAAACAAAAGGGTGAAGATATTAACGTGTTAGAAAGCCTTAGTCGGTATGACCTCACCCTTAACTATGTGAATCAACAGAATAAGACACTACAGAATGGCGACTATAACGATTTAGACATAGCATTGTCGGATCTTAGTTCCGACGTGTTTACCGATAGCGAGCTGCAGTTTTCGATGCCCGAGACGACTGAGTGGACGCGCGAGAGACCAAACAAAGATTTTTATCCCGATTCGCCTGTGTCTGAGTGCGCGTTCTTCAAGACGCCGTGTAGTTCGAGGAAAAACAGTTACGACTCTTCCGTGTCAGATGAAAGTCTGACAGATATGGAGATGGATGGCAGGGGGGAGATACAAGCTCCCATTCGTAAATCTCTTGGTACGACGAACGGCCATAACGGTCACACAAATGGATACATGAACGGCCATGCTAAAGGAGAACCTAATTCTAAAGGACCACCAATGCAAAACGGAAAGCAAAAATCTGGAAACGCACCAAAGAAATCAGAATTAAAGAACGTTAAGTCCAAAGCTACTTCAAGTAGTAACAGATACAAACCAGGTGGTGGTAAAGGGAAGATTACGCACAAAAAGGTGGACTACTCAAAAACAGCTAAATCCAAAGTAAATTCGTTCCGTAACGTTGACCATGCACCTGGAGGAGGTAACAAAAAGGTTAACAATGGTCGAATGAACCAATACAAACACGTGGAATCGAGGACAGATACACATGGAATCGAGGCTTACAGCCATTTACCCGCGGAATTCCAAGAAATCGCGCGTCGATTGTCACGCCAGGACAAGGACCTGCGTGACATGACAGGGGGAAGAAGTCGACCTCGGTCCAGGCTTACCAGCCGATCCAGTCGTGGTGGATCGTTGAGCCCAAGAGATCGTTCACCGGCAAGGCATGGTAGTCTAGCAAGGAATAATATCTCCGCCTCATCACTAAGTTTAACATCGACCGCTTCAGGCAAAAAGCGTCGAAATCCAAGCCTTCACCCTCGACCCATCACTCCGAGCTTAAGCCGATCGCATCCCGCCACATCTTGTACTCTATACGACTCTAGATCAAGACCGTCGTCACGTCAAGCGTCACGCTCTTCATCTCCTGTCAGGTCACGCAATCCTTCGCCCTCGAGAGGGAAATCACGAACGGGAACAGTGTCCAACGGTAGAACATCGCGCAGTGCATCACCTACTCGTGAACGACGGTCAGGCAAGTCATCAGCTCCTGGTGGCTCGGGATACGACACACCTCGTAGCGAAAGGTCCAAGTCACGCAGTCGAACTGGGTCACGCTCTCGACTTGATGATGCCACTCCTGTTATGGACATCCTTGCTTACAGCACCTCCAGGTCTTTATTCCAAGTGATTCCAGTCCACAGATAA

Transcript

gene12222.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00418	Tubulin-binding	Tau and MAP protein, tubulin-binding repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027324	Family	Microtubule associated protein MAP2/MAP4/Tau	Interproscan
IPR001084	Repeat	Microtubule associated protein, tubulin-binding repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11501	MICROTUBULE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0015631	Molecular Function	tubulin binding	Interproscan