Detailed information of gene12486.t2 in Actinoscyphia liui

Genomic Location: chr3:50933817...50948307
NR annotation: CAH3149116.1, unnamed protein product, partial [Porites evermanni]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000320 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21787
all species →		TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan
PF13613
all species →		HTH_Tnp_4Helix-turn-helix of DDE superfamily endonucleaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048365
all species →		DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan
IPR027805
all species →		DomainTransposase, Helix-turn-helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23080
all species →		THAP DOMAIN PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for gene12486.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene12486.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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