Detailed information of gene12499.t1 in Actinoscyphia liui

Genomic Location: chr3:51076794...51113690
NR annotation: XP_031568511.1, RNA-binding motif, single-stranded-interacting protein 1-like isoform X3 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4MM23Protein alan shepard OS=Drosophila willistoni OX=7260 GN=shep PE=3 SV=2
Q8MSV2Protein alan shepard OS=Drosophila melanogaster OX=7227 GN=shep PE=1 SV=2
B4HUE4Protein alan shepard OS=Drosophila sechellia OX=7238 GN=shep PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR050441FamilyRNA-binding motifInterproscan
IPR002343FamilyParaneoplastic encephalomyelitis antigenInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48034TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0048026Biological Processpositive regulation of mRNA splicing, via spliceosomeInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24990RBMS; RNA-binding motif, single-stranded-interacting protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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