Detailed information of gene12660.t1 in Actinoscyphia liui

Genomic Location: chr3:53681249...53685599
NR annotation: XP_031563851.1, ultraviolet-B receptor UVR8-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q947D2PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRAF1 PE=1 SV=1
B4IC49Lateral signaling target protein 2 homolog OS=Drosophila sechellia OX=7238 GN=GM10129 PE=3 SV=1
B3P851Lateral signaling target protein 2 homolog OS=Drosophila erecta OX=7220 GN=GG12136 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000306DomainFYVE zinc fingerInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11964PELI; pellinoEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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