Detailed information of gene12779.t2 in Actinoscyphia liui

Genomic Location: chr3:55960385...56004677
NR annotation: XP_028512881.1, uncharacterized protein LOC110232353 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O88488Phosphatidylinositol phosphatase PTPRQ OS=Rattus norvegicus OX=10116 GN=Ptprq PE=1 SV=1
P0C5E4Phosphatidylinositol phosphatase PTPRQ OS=Mus musculus OX=10090 GN=Ptprq PE=1 SV=1
Q58EX2Protein sidekick-2 OS=Homo sapiens OX=9606 GN=SDK2 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000019 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885
all species →
Ion_trans_2Ion channelFamilyInterproscan
PF00629
all species →
MAMMAM domain, meprin/A5/muDomainInterproscan
PF07534
all species →
TLDTLDDomainInterproscan
PF04886
all species →
PTPT repeatRepeatInterproscan
PF00041
all species →
fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR000998
all species →
DomainMAM domainInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013099
all species →
DomainPotassium channel domainInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR006571
all species →
DomainTLDc domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006970
all species →
RepeatPT repeatInterproscan
IPR013320
all species →
Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170
all species →
PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene12779.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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