Detailed information of gene13361.t1 in Actinoscyphia liui

Genomic Location: chr3:66126879...66152442
NR annotation: XP_020902667.1, WD repeat and HMG-box DNA-binding protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O75717WD repeat and HMG-box DNA-binding protein 1 OS=Homo sapiens OX=9606 GN=WDHD1 PE=1 SV=1
O13046WD repeat and HMG-box DNA-binding protein 1 OS=Xenopus laevis OX=8355 GN=wdhd1 PE=1 SV=1
P59328WD repeat and HMG-box DNA-binding protein 1 OS=Mus musculus OX=10090 GN=Wdhd1 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12341Mcl1_midMinichromosome loss protein, Mcl1, middle regionRepeatInterproscan
PF20946Ctf4_CDNA polymerase alpha-binding protein Ctf4, C-terminal domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022100DomainMinichromosome loss protein Mcl1, middle regionInterproscan
IPR048591DomainDNA polymerase alpha-binding protein Ctf4-like, C-terminal domainInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19932WD REPEAT AND HMG-BOX DNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043596Cellular Componentnuclear replication forkInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11274WDHD1, CTF4; chromosome transmission fidelity protein 4-Chromosome and associated proteinsko03036deepkoala

TOP