Detailed information of gene13623.t1 in Actinoscyphia liui

Genomic Location: chr3:72306968...72307627
NR annotation: CAG4929464.1, unnamed protein product [Parnassius apollo]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10401Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P10394Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000011 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078
all species →
RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128
all species →
Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000477
all species →
DomainReverse transcriptase domainInterproscan
IPR053134
all species →
FamilyRNA-directed DNA polymerase homologInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24559
all species →
TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for gene13623.t1 in Actinoscyphia liui.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene13623.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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