Detailed information of gene13742.t1 in Actinoscyphia liui

Genomic Location: chr4:1659224...1680942
NR annotation: XP_020906648.2, acyl-coenzyme A synthetase ACSM3, mitochondrial [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q53FZ2Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Homo sapiens OX=9606 GN=ACSM3 PE=1 SV=2
Q5REV5Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Pongo abelii OX=9601 GN=ACSM3 PE=2 SV=1
Q3UNX5Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Mus musculus OX=10090 GN=Acsm3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001394 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan
PF13193
all species →		AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020845
all species →		Conserved_siteAMP-binding, conserved siteInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan
IPR051087
all species →		FamilyMitochondrial Acyl-CoA Synthetase Medium-ChainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110
all species →		DomainAMP-binding enzyme, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43605
all species →		ACYL-COENZYME A SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004321
all species →		Molecular Functionfatty-acyl-CoA synthase activityInterproscan
GO:0005759
all species →		Cellular Componentmitochondrial matrixInterproscan
GO:0006633
all species →		Biological Processfatty acid biosynthetic processInterproscan
GO:0006637
all species →		Biological Processacyl-CoA metabolic processInterproscan
GO:0015645
all species →		Molecular Functionfatty acid ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01896ACSM; medium-chain acyl-CoA synthetaseEC:6.2.1.2
Lipid biosynthesis proteinsko01004deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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