Detailed information of gene13956.t1 in Actinoscyphia liui

Genomic Location: chr4:5135033...5148152
NR annotation: XP_031551908.1, proteasome subunit beta type-1-A-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DRF3Proteasome subunit beta type-1 OS=Danio rerio OX=7955 GN=psmb1 PE=2 SV=1
Q9IB84Proteasome subunit beta type-1-A OS=Carassius auratus OX=7957 GN=psmb1-A PE=2 SV=1
Q9IB83Proteasome subunit beta type-1-B OS=Carassius auratus OX=7957 GN=psmb1-B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007559 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227
all species →		ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023333
all species →		FamilyProteasome B-type subunitInterproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR001353
all species →		FamilyProteasome, subunit alpha/betaInterproscan
IPR016050
all species →		Conserved_siteProteasome beta-type subunit, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32194
all species →		METALLOPROTEASE TLDDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005839
all species →		Cellular Componentproteasome core complexInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02732PSMB1; 20S proteasome subunit beta 6EC:3.4.25.1
Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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