Detailed information of gene14352.t1 in Actinoscyphia liui

Genomic Location: chr4:12902155...12929197
NR annotation: XP_031572433.1, uncharacterized protein LOC116306499 [Actinia tenebrosa]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B5YFT1D-alanine--D-alanine ligase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) OX=289376 GN=ddl PE=3 SV=1
A5D2F9D-alanine--D-alanine ligase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=ddl PE=3 SV=1
P55650Uncharacterized protein y4sG OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a01660 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005446 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07478
all species →
Dala_Dala_lig_CD-ala D-ala ligase C-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011761
all species →
DomainATP-grasp foldInterproscan
IPR011095
all species →
DomainD-alanine--D-alanine ligase, C-terminalInterproscan
IPR013815
all species →
Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23132
all species →
D-ALANINE--D-ALANINE LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008716
all species →
Molecular FunctionD-alanine-D-alanine ligase activityInterproscan
GO:0009252
all species →
Biological Processpeptidoglycan biosynthetic processInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene14352.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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