Detailed information of gene14462.t2 in Actinoscyphia liui

Genomic Location: chr4:15271150...15319552
NR annotation: XP_022793899.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like, partial [Stylophora pistillata]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4LDE5Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SVEP1 PE=1 SV=3
A0A1D5NSM8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
Q7Z407CUB and sushi domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CSMD3 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000334 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR050350
all species →		FamilyComplement & Cell Adhesion RegulatorsInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19325
all species →		COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAININGInterproscan

 Gene Ontology
No Gene Ontology signature was detected for gene14462.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene14462.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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