Detailed information of gene14802.t1 in Actinoscyphia liui

Genomic Location: chr4:22079589...22092886
NR annotation: XP_028516583.1, helicase SKI2W [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15477Superkiller complex protein 2 OS=Homo sapiens OX=9606 GN=SKIC2 PE=1 SV=3
Q6NZR5Superkiller complex protein 2 OS=Mus musculus OX=10090 GN=Skic2 PE=2 SV=1
O59801Putative ATP-dependent RNA helicase C550.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC550.03c PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08148DSHCTDSHCT (NUC185) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050699FamilyRNA/DNA HelicaseInterproscan
IPR012961DomainATP-dependent RNA helicase Ski2/MTR4, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12131ATP-DEPENDENT RNA AND DNA HELICASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0055087Cellular ComponentSki complexInterproscan
GO:0070478Biological Processnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12844PRPF31; U4/U6 small nuclear ribonucleoprotein PRP31-Spliceosomeko03041deepkoala

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