Detailed information of gene14974.t3 in Actinoscyphia liui

Genomic Location: chr4:24699064...24710950
NR annotation: XP_020904610.1, tetratricopeptide repeat protein 28 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96AY4Tetratricopeptide repeat protein 28 OS=Homo sapiens OX=9606 GN=TTC28 PE=1 SV=4
Q80XJ3Tetratricopeptide repeat protein 28 OS=Mus musculus OX=10090 GN=Ttc28 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan
PF14938
all species →
SNAPSoluble NSF attachment protein, SNAPRepeatInterproscan
PF12770
all species →
CHATCHAT domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR024983
all species →
DomainCHAT domainInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR051476
all species →
FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46630
all species →
TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003341
all species →
Biological Processcilium movementInterproscan
GO:0005929
all species →
Cellular ComponentciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene14974.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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