Genomic Location: chr4:24780640...24811510
NR annotation: XP_020905394.2, ATP-dependent RNA helicase A [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families
| CDS |
| gene14979.t3 |
| Transcript |
| gene14979.t3 |
| Protein |
| gene14979.t3 |
| UniProt accession | Description |
|---|---|
| Q28141 | ATP-dependent RNA helicase A OS=Bos taurus OX=9913 GN=DHX9 PE=1 SV=1 |
| Q68FK8 | ATP-dependent RNA helicase A protein OS=Xenopus laevis OX=8355 GN=dhx9 PE=2 SV=1 |
| Q08211 | ATP-dependent RNA helicase A OS=Homo sapiens OX=9606 GN=DHX9 PE=1 SV=4 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000674 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21010 all species → | HA2_C | Helicase associated domain (HA2), ratchet-like | Domain | Interproscan |
| PF00271 all species → | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF07717 all species → | OB_NTP_bind | Oligonucleotide/oligosaccharide-binding (OB)-fold | Domain | Interproscan |
| PF00035 all species → | dsrm | Double-stranded RNA binding motif | Domain | Interproscan |
| PF00270 all species → | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF04408 all species → | HA2_N | Helicase associated domain (HA2), winged-helix | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR044445 all species → | Domain | DHX9, first double-stranded RNA binding domain | Interproscan |
| IPR014720 all species → | Domain | Double-stranded RNA-binding domain | Interproscan |
| IPR007502 all species → | Domain | Helicase-associated domain | Interproscan |
| IPR011050 all species → | Homologous_superfamily | Pectin lyase fold/virulence factor | Interproscan |
| IPR001650 all species → | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR002464 all species → | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011709 all species → | Domain | DEAD-box helicase, OB fold | Interproscan |
| IPR011545 all species → | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR048333 all species → | Domain | Helicase associated domain (HA2), winged-helix domain | Interproscan |
| IPR044446 all species → | Domain | DHX9, second double-stranded RNA binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18934 all species → | ATP-DEPENDENT RNA HELICASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0003724 all species → | Molecular Function | RNA helicase activity | Interproscan |
| GO:0004386 all species → | Molecular Function | helicase activity | Interproscan |
| GO:0005622 all species → | Cellular Component | intracellular anatomical structure | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0016887 all species → | Molecular Function | ATP hydrolysis activity | Interproscan |
| GO:0043138 all species → | Molecular Function | 3'-5' DNA helicase activity | Interproscan |
| GO:0045944 all species → | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| GO:0050684 all species → | Biological Process | regulation of mRNA processing | Interproscan |
| GO:1990904 all species → | Cellular Component | ribonucleoprotein complex | Interproscan |
| GO:0003725 all species → | Molecular Function | double-stranded RNA binding | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
gene14979.t3.