Detailed information of gene15155.t2 in Actinoscyphia liui

Genomic Location: chr4:27454437...27469298
NR annotation: XP_020916243.1, laminin subunit gamma-1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JP86Laminin subunit gamma-1 OS=Xenopus tropicalis OX=8364 GN=lamc1 PE=2 SV=1
P11047Laminin subunit gamma-1 OS=Homo sapiens OX=9606 GN=LAMC1 PE=1 SV=3
Q1LVF0Laminin subunit gamma-1 OS=Danio rerio OX=7955 GN=lamc1 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001810 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00055
all species →
Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan
PF00053
all species →
Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052
all species →
Laminin_BLaminin B (Domain IV)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008211
all species →
DomainLaminin, N-terminalInterproscan
IPR002049
all species →
DomainLaminin-type EGF domainInterproscan
IPR050440
all species →
FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR000034
all species →
DomainLaminin IVInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →
NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009887
all species →
Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →
Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05635LAMC1; laminin, gamma 1-Prion diseaseko05020deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP