Gene detail

Detailed information of gene15537.t1 in Actinoscyphia liui

Genomic Location: chr4:32282588...32288061
NR annotation: XP_031568571.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P06205	C-reactive protein 1.1 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P06207	C-reactive protein 3.3 OS=Limulus polyphemus OX=6850 PE=1 SV=1
P49263	Pentraxin fusion protein OS=Xenopus laevis OX=8355 GN=pxn1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00354	Pentaxin	Pentaxin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001759	Family	Pentraxin-related	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan