Gene detail

Detailed information of gene15579.t1 in Actinoscyphia liui

Genomic Location: chr4:32815275...32824218
NR annotation: XP_020895241.1, protein maelstrom homolog [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene15579.t1

GAAAAAGTGAAAGTGCTGAAAGTGCGAAAGTTTGGCTTGATTTCTGTCTTGAAAATATGCCGTCCAAAAAGAACAAGAATCAACCCAGGAATGCTTTCTACTTCTATATGGTGTCCTTGAAGCCTCAGCTTCAACGGCAGGGAGTTGTTTTAGAGAATGGGATGCAAAGTTTAGCGGAGATAGCGGGCCCACGATGGAAGGACTTGCCAGAACATGAGAAGGAAGTTTACCAGGAAATGGCCAGACAAGCTAAGACCAATAGACAATATGGCCCAGCACGGAATGACCGCAGAGACTGTACAGGAGAATTTATATCACAAAGAGTTGACATGGTGAGCCTGAATGAAAACAAGAGAAGAAAACAACGAGATGAAGTGAAGTCCACATGGCCACCAGGAAAATTGGTTTGCGATGAGAAGTTCTTTATGATTGGATTCATGTCGTTATTTGAAGCAGCGGCTGACCAACAACTGCCTTGCGAACTGGGTGTGGCAGAGTTTTCCATTAACTCTGGTATAATAAAATCCATGCATAAGTTTATCAAACCAGGTAAAATTCCTCTTGGATTCAGATATAATTGCATGAGCTTAAGCGAGAAAATGCACAAGATCCCCGTAACTGGTCTGGCCAAAGAAGAAGATTCCTATTACAGTCTACTTATTGATATCATGGCATTTATAAATCCCAGCGGATACCATATATTTCCACCTGTATACTGCAGAGCATCAGAAACAAAACAGACTGAAGCCTGTCTGGATTGGTTGGCTATGAGTGCAGGAATGCCAAACAGAGTTAAGAAAGTATATGAACTAGAGGGTCTCATTTGTGATCTGTATAGCCACATTTCCAAACCTGACAGTCAGGGTATGTCTAAATCACAAGCTACAGATTTAATATCATCCACCGCATTTGATTATGAACCTGGTACAAGATGTGGTTGGCATGAAAATGAAGAAGTAAAGTACTGTGCTCTTGCATCTGTGAAGCGCTACTGTTATTGCATGGCAGACTTTCTCTGTCCTCACTTCAATGTCATCCTGACAACTCGACACATGCCTGAAAGACCTGAAGGAACATTTGGAACAGTTCTAACGACCAACGATAACACTAGTAGAAAAACTGATAACACAAGCAATGGATATGATGACAATGAAGCCTCCTACAACGGTGCACAAAGGCCACAAATGGGACGTGGCTATGGCAACAATGAATCCTACAACAATTACAACAGAACTGGGCCAACATATGAAAGCACCAGCCTAGCCACCCCAGAACCCTCTTATGATAATATATCACCATGGCAACAAGAACAAAGGCCAGTACAAGAGCCACCCCCAGCACTCACCCAACAGACTTCATATGCTTCAAGTCTTGAAGGAGCCAGAGCATTGCCGCTAGGGCGTGGTCGAGGAAGAGGCAGAGGGGTACCGTCAAGCCAGTTTGTACGTCAACCCAACATGCCTCAACAAGCATTTGGAAGAGGGATGGGAAACAGACCAGGTTCTTTAGGAAATGCTGGAGCATCAGCAGCAAGTTTTACGTCAACATCTGATCAGAGTTATGCGAGCAAGGGACGAGGTGTACGAATCCCTAACACTAAACCCAAAGTTTATGCAGGGTCTGCTTCCGCACCACACCCTTCTACGGCACCCCCACCACCACTAGCATGGCAACAATCACCACTACCACAACAGCACTATCAACAACAACAGCAACAACCACAACACCAGTACCAGCAGCAACAATCACAACAACACCTACAACAGCAGCAACAACAGCAGCAGCAACAACAACAAATGTATTACGATTATGAACAAACGAACCAACCATCATGGCAATTACCGAACCAACATGAGGAGCCACACCCACCGAGTTCTGGAATATATGGCATGCGTAACATTAGCGATGTCATGGAAATGATGGCTCAAATGAACATGGTCAAGAACCAATAGATTACACAAGCTACCTATGAAGTGCTCTCTTACCACTACCCCTCCCCTCAAGGGACAGGGATATTAGCTTAGTGTGGGATAGGGACAAGGGCAGT

Protein

Uniprot

Gene family

Uniprot term	Description
Q96JY0	Protein maelstrom homolog OS=Homo sapiens OX=9606 GN=MAEL PE=1 SV=1
A4UTQ0	Protein maelstrom homolog OS=Sus scrofa OX=9823 GN=MAEL PE=2 SV=1
Q4R786	Protein maelstrom homolog OS=Macaca fascicularis OX=9541 GN=MAEL PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09011	HMG_box_2	HMG-box domain	Domain	Interproscan
PF13017	Maelstrom	piRNA pathway germ-plasm component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039259	Family	Protein maelstrom	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan
IPR024970	Domain	Maelstrom domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21358	PROTEIN MAELSTROM HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0007140	Biological Process	male meiotic nuclear division	Interproscan
GO:0007283	Biological Process	spermatogenesis	Interproscan
GO:0034587	Biological Process	piRNA processing	Interproscan
GO:0043186	Cellular Component	P granule	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0060964	Biological Process	regulation of miRNA-mediated gene silencing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18411	MAEL; protein maelstrom	-	Chromosome and associated proteins	ko03036	deepkoala