Gene detail

Detailed information of gene15678.t1 in Actinoscyphia liui

Genomic Location: chr4:34159163...34169446
NR annotation: XP_020899199.1, A disintegrin and metalloproteinase with thrombospondin motifs 18 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q5W7F4	A disintegrin and metalloproteinase with thrombospondin motifs 1 OS=Bombyx mori OX=7091 GN=ADAMTS-1 PE=2 SV=1
B7U492	Snake venom metalloproteinase VMP1 OS=Agkistrodon piscivorus leucostoma OX=459671 PE=2 SV=1
P0C6E3	Zinc metalloproteinase-disintegrin bilitoxin-1 OS=Agkistrodon bilineatus OX=8718 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13688	Reprolysin_5	Metallo-peptidase family M12	Family	Interproscan
PF17771	ADAMTS_CR_2	ADAMTS cysteine-rich domain 2	Domain	Interproscan
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR041645	Domain	ADAMTS, cysteine-rich domain 2	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan