Gene detail

Detailed information of gene15876.t2 in Actinoscyphia liui

Genomic Location: chr4:36476146...36484429
NR annotation: KXJ18569.1, Atrial natriuretic peptide receptor 1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene15876.t2

ATGCACCGCCGGGTCGCGTGGTCGACTGGGAATGAGAACAAGGAACAGAAACCTACTGGCCATAGTGAAATGAACAACATGGGTCTGTGCAGCCAAGAAATGGCAGCGGAAAACGAGCAAGCTGAAGCAACAACGGCAACAACAAATCTAAGCTTGCCGCAAGCAACGACTTCAACTGGTAAAACAATGATATCGAGGTTCGGTATACCAAGTGGTCTTCTGTGGGCAGCGGCACGCATCCACCCCGTATCAAACAGCACAACCTCTCTCGAATCATGTGAATACAATGCAGCATCAAAGTGCCAGAGGTATTGGTTGACTGTGAGGATTCTGGCAGTCTCGTTATTCTCAGTATTGGGTCTATTGGTCGTCGTTTCGTTGCACGTCCACGAAGCTGTAGCTTCTGTGAAGACATTTAAGACGGTCAAGAAAGTAGTGGATGACAGTGTAAAGGTGGCAGACTTAATTCATAGTCTGCAAGTCGAACGGGGTTTGACAGTGTTGAGTATCTCGTCTAATCAGAACGCGAGTATCATTGGAACGTTGGCATCTGCGAGAAATGAAACTTTACATGCTATAACGCACATAGCGAGCTGGCTTAGCGATCTTCCTAGCAACTCAGAGTCATTCCACTCAGAAGAAGAGTTTATTCGAGAGATTGAACAACACAGAGACGTTATTGACCATGGAAGAAATTCCACCATCAAAAAAGAAATTGACTTTTATACTCACCACATAGAAATGTCGTTGGACTGGTTATCCCGAGGCATTAAAAAGAACTATCCACAAAACAAGATTATCGATCTGCTGGGCTATCAGATGTTTTTGATGGCCAAGGATAAAATTGGTATCGAGAGGGCACTGGGCGGGTCGTTCTTCGCTCGTGGGTATTTTAACGATACTAGTGACCTACTGTGGTATGCAGAACAGAATTACATAGGTCATATATTTTTACAAAAAAGCATGGAATTAATGAAATATCTTCAAGATGTCTATCAAGATTCCATCTCTGCGGAGGTGATCGATGCTTTAGATTCAAAGCGATCAATCATTTTGGAAAACAAACCTCATAAAGGAAACGATTCTGCGGGAAGCCAGTGGTTTTCACTAATGACGCACTACATAAACGTACTTCTCGTTGTTCAAAGAGCCGCAGGCGAGAACGTCAAGTCGGCGCTGCAAAAAGATGTCGATACCAAAGAGACCGACTTAATGATTCGCTTGGTCTTTCTTGTCCTGGTTTTGATCCTGGTGCCCTTGATGGTCTTTGCTGTCATACGCATGACAAATACAATACAAGAATACGCATTTCAACTAGAAGCCACCACATTGAATCTACAAGAGGAACAAAAGAGGACCGACAGGGTGCTATTCGCCATGTTTCCTCAGTCGGTGGCACAGACTCTCAAAATGGGAGAGAAAGTGAATGCGGAGTACTTTGATAGCGTGACAGTGTTTTTTAGTGACATTGTGAACTTTACCAACATCTGCGCCATGATTTCACCCATGGAAGTCACGTCAATGCTCAACGGTATCTACAGCGCATTTGACGACACTATTGACAAATATGACGTCTACAAGGTTGAAACCATCGGCGATGCCTACATGGTAGTGTCTGGTCTCCCAAAAAGAAACGGCGTTCAACACGTGGATCAGATATGTCGTATGGCCATTGACTTGGTACAAGTCACACACGACTTTGAACTGGTAGACGTGCCCGCCGAGGTTCTCTTGATTCGTGTTGGAGTGCATACAGGCCCATGTGTGTCTGGTATTGTGGGAGTGAAGATGCCAAGATACTGTTTATTTGGAGATACAGTGAACACTGCATCTAGAATGCAAACAACAGGTTTTCCTCAAAAGATCCACATCACTGAGAGCACGCTCAAGGGACTGATCTCTTTTAAGGGATATGAGACGGACTTTCGTGGACACGTCGAAGTAAAGGGAAAAGGACAGATGGAGACTTACTGGCTAAACAGCTGTGTGTCACAGCATCAGAAAACAGAGGCTTCAACAGAAGATTCGACAGACAAACTGTTAGTTACGAATCAACAGCTATATTAG

Transcript

gene15876.t2

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A0U1RPR8	Guanylate cyclase D OS=Mus musculus OX=10090 GN=Gucy2d PE=2 SV=1
P51839	Guanylate cyclase 2D OS=Rattus norvegicus OX=10116 GN=Gucy2d PE=1 SV=2
O19179	Retinal guanylyl cyclase 1 OS=Canis lupus familiaris OX=9615 GN=GUCY2D PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002202 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08376 all species →	NIT	Nitrate and nitrite sensing	Family	Interproscan
PF00211 all species →	Guanylate_cyc	Adenylate and Guanylate cyclase catalytic domain	Domain	Interproscan
PF07701 all species →	HNOBA	Heme NO binding associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013587 all species →	Domain	Nitrate/nitrite sensing protein	Interproscan
IPR001054 all species →	Domain	Adenylyl cyclase class-3/4/guanylyl cyclase	Interproscan
IPR029787 all species →	Homologous_superfamily	Nucleotide cyclase	Interproscan
IPR050401 all species →	Family	Cyclic nucleotide synthase	Interproscan
IPR011645 all species →	Domain	Haem NO binding associated	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11920 all species →	GUANYLYL CYCLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0009190 all species →	Biological Process	cyclic nucleotide biosynthetic process	Interproscan
GO:0035556 all species →	Biological Process	intracellular signal transduction	Interproscan
GO:0001653 all species →	Molecular Function	peptide receptor activity	Interproscan
GO:0004016 all species →	Molecular Function	adenylate cyclase activity	Interproscan
GO:0004383 all species →	Molecular Function	guanylate cyclase activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006182 all species →	Biological Process	cGMP biosynthetic process	Interproscan
GO:0007168 all species →	Biological Process	receptor guanylyl cyclase signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene15876.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.