Detailed information of gene16024.t1 in Actinoscyphia liui

Genomic Location: chr4:38424762...38452018
NR annotation: CAB4036569.1, Hypothetical predicted protein [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1L0T3Scavenger receptor cysteine-rich domain-containing group B protein OS=Mus musculus OX=10090 GN=Ssc4d PE=2 SV=2
Q5G265Neurotrypsin OS=Saguinus labiatus OX=78454 GN=PRSS12 PE=3 SV=1
O43866CD5 antigen-like OS=Homo sapiens OX=9606 GN=CD5L PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03160Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR017448DomainSRCR-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007154Biological Processcell communicationInterproscan

TOP