Detailed information of gene16387.t2 in Actinoscyphia liui

Genomic Location: chr4:43274730...43281955
NR annotation: XP_020908087.1, calmodulin-2/4-like [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05419Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
P02597Calmodulin, striated muscle OS=Gallus gallus OX=9031 GN=CCM1 PE=3 SV=2
P04464Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011187 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →
EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247
all species →
Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR050403
all species →
FamilyMyosin Regulatory Light ChainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23049
all species →
MYOSIN REGULATORY LIGHT CHAIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene16387.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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