Detailed information of gene16955.t2 in Actinoscyphia liui

Genomic Location: chr4:53945512...53954541
NR annotation: XP_020911695.1, neural cell adhesion molecule 1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14982Opioid-binding protein/cell adhesion molecule OS=Homo sapiens OX=9606 GN=OPCML PE=1 SV=1
Q5IS61Opioid-binding protein/cell adhesion molecule OS=Pan troglodytes OX=9598 GN=OPCML PE=2 SV=1
P11834Opioid-binding protein/cell adhesion molecule OS=Bos taurus OX=9913 GN=OPCML PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009068 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →
Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051275
all species →
FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11640
all species →
NEPHRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →
Cellular Componentplasma membraneInterproscan
GO:0005911
all species →
Cellular Componentcell-cell junctionInterproscan
GO:0050839
all species →
Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609
all species →
Biological Processcell-cell adhesionInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene16955.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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